Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | PTGRVYGGGSGSDGVFANLSAKPEAGEKTEEHPPTYEQAAADAAPPYWETTILAPGLGGPDEVYVDGLPVGSVFSFIWNGMISMSFQLVGFLLTYLLHTTHAAKNGSRAGLGITLVQYGFYMKGSGVSSPPSNGQDPTYAQPPDPNSHNFDPNQVNTAAQGMDSTGSSGSWSSVANTEWLAYILMVVGWFILIRAVSDFLKARRHEQLVLQSPER |
1 | 5yfpC2 | 0.09 | 0.08 | 3.05 | 0.97 | SPARKS-K | | SIYDRIYNFVALMEHIERLLVAELAEDALETGCPHLLTSARDQEQVVVMAKEATEDAQRTVMKLLSGIIS-KFDKLLDGLTYDIVEMAIRLFKIYDLEEREDLRIEAIRNIIK---KKEIEIEKSSIKKLPNSKNTARLQDETPKVIEYPTNKGLYQEIMSGTISKYVGDQKFDVNMDWIFNELIIVKEHIANCCPPHWNI-------------- |
2 | 6bo4A2 | 0.10 | 0.07 | 2.42 | 0.55 | FFAS-3D | | ------------------------------------------------------------------------SLVLGWLNLLYYTFQHTGIYSVMIQKVILRDLLRFLLVYLVFLFGFALVSLSREARSPKAPEDNNSTVTEQPTVGQEEEPAPYRSFTIGMGELAFQEQLRFRGVVLLLLLAYVLLTYVLLLNMLIALMSVLEMENGYWGTPDE |
3 | 5v7pA | 0.12 | 0.07 | 2.66 | 0.35 | HHpred | | ----------------------------------------------FLAIAIV-----QPKQVSTDSFVINHSPQYTIAAV----SSWVEFFIETYFFPGLK-EIHWLSNIGLCVCILGEVLRKTAILTAGSN--F--NHLVQCE--KSSDHVLVTHG-----------VYAWFRHPSYVGWFYWSIGTQIILSWMFFKERIYIEESMLLSF--- |
4 | 4rfqA | 0.13 | 0.12 | 4.22 | 0.57 | MUSTER | | PSQDTDSPLSAAS---SSRNLEPHGKQPSLAMPKDLKKMLENPGFQHVKLSVVKTILLKENFPYEGGLKIWECTFDLLAYFTKAKVKFLG------LLGITAFKGGSKNSMVIDEVTLPNVVANSTLEDRKPKVTQLYKCRFFSGEWSEFCKLVLSSEKLFVKYD-TSETIYNPDYYSNLHQTFLRLGRVLLVHLFQKFVEERRILKIIDEGLKR |
5 | 4he8F | 0.09 | 0.04 | 1.58 | 0.96 | CNFpred | | ----------------------------------------------------------------------VTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYST-------------------------------------------------ISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIH |
6 | 1vt4I3 | 0.13 | 0.09 | 3.08 | 1.27 | HHsearch-2 | | ----------------------------EYALHRSIV--DHYNIPKTFDSDDLIPPY--LDQYFYSHIHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW--NASGSILNTLQQLKFYKPYICDNDP-------KYERL--VN--AILD--------F-----LPKIEENLICSKYTDLLRIALMAEDEA-------IFEEAHKQVQRGGGG |
7 | 5do7A2 | 0.05 | 0.05 | 2.13 | 0.64 | Neff-PPAS | | ---LRVRSNVLKGAIQDRVGLLYQESQDGLYQKWQMMLAYALHVLPFSVVATMIFSSVCYWTLGLHPEVARFGYFSAALLAPHLIGEFLTLVLLGIVQNPNIVNSVVALLSIAGVLVGSGFLRNIQEMPIPFKIIYGLNFTCAFTQGIQFIEKTCP------------------GATSRFTMNFLILYSFIPALVILGIVVFKIRDHLIS----- |
8 | 5ktfA | 0.11 | 0.04 | 1.34 | 0.48 | HHsearch | | -------------------------------------------------------------------------------------------------------------GSK---IEPV--VLPLLWFE--------QSGAMGGKPLSTFY----------------TQLVLMPQVLHYAQYVLLGLGGLLLLVPIICQLRSQEKCF--LFWS-- |
9 | 3hp7A | 0.14 | 0.10 | 3.36 | 0.68 | SP3 | | VEDITIGAST---GGFTDVLQNGAKLDVGTNQL---VWKLRQDD-------RVRSEQYNFRYAEPVDFTEGLDVSFILNLILPALAKILGVVALVKPQFEAGRGNGVLETVTAFAVDYGFSVKGLDFSPIQGGHGNIEFTDSPQNDVPTSIKEVVAQAHKEFKKNEEE----------------------------------------------- |
10 | 2y9yB1 | 0.08 | 0.07 | 2.89 | 0.78 | PROSPECTOR2 | | VPSSFFHSDLQNLSDLYPGDPNGSAAGIVKGPEDTSLLLYPDFMAI-------------------------KDIVYCQDKMNLLFLSLLDLTWENLKSSSKKVFSNPLYRLRLVAREWGYQQLPSDQDISKPKTALFEQDEQTPVVDPSHPEILTPNIYTWNANEPLPLESNPLYNREMDKNGILALKPVVLLRALTDWCAIHDEIYK-LTHGKK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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