Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TWGNKPPPKAGDVVFINKGQTILLDIDTPVLNLILIQGGKLMFDREKPSLHLQAEKILITDKGALQVGTEDNPFPGKATITLHGHVRSREMPVYGTKMIALREGTLDLHGQHVPITWTRL |
1 | 4phbA1 | 0.14 | 0.12 | 4.25 | 0.90 | SPARKS-K | | ADNVDGLSVSEREVKITKPGMYTFSGTWND-GQILVDI------GKEFEAVLVLDGVNITNTAPIYIKSAE-----KVKIELADLTDAEFYEFKPNACIYSRDGNLTVNANFNNGIG--- |
2 | 5gqtA3 | 0.10 | 0.10 | 3.68 | 0.52 | FFAS-3D | | --QKGEGPGLGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLLGVRMVSVGSTLYVGRDASRQYNGFYSFDLLTPVEEGPTPRSFHSMAADEENVYVFGGIVDKKWFHC |
3 | 5j44A | 0.25 | 0.23 | 6.96 | 0.30 | HHpred | | ---DG-KVQAFSSVGIASGRTVVLSDSQQNPDNISWRGGRLELNGNN----LTFTRLQAADYGAIITNNSEK----KSTVTLDLQTLKDNVPIFGPGSITKKSGTLIFQGHPVIHAGT-- |
4 | 5ny0A2 | 0.18 | 0.17 | 5.67 | 0.66 | MUSTER | | IWADIGIHPHTTALTIGNNATLTMENGNSALNIKLDGDTSNSFTGEGSTVKLSADNVRIEDSNTANVS-----FAKGSDVTLHAGTGSNLRMGASISNQIDFNGKATFI-SEFDYYWTGS |
5 | 3szeA | 0.22 | 0.18 | 5.79 | 0.95 | CNFpred | | TFKGA-------GVDTRNGSTVEWNIRYD-DNLHKIGDGTLDVRKTNTNLKTGEGLVILGA-NNIYITS------GDGTVRLNAENALS--GEYNGIFFAKNGGTLDLNGY--NQSFNKI |
6 | 3h09B | 0.17 | 0.17 | 5.50 | 0.67 | HHsearch-2 | | TWKGAGLPNGNLNVTFKEQNRFLLTGGTNLNGDLKVEKGTLFLSGRRINRNFKATNINVTNNATLYSGRNVANITSNAKVHIGYKAGDTDYDKLGNANFVNLFGTISGTGNSENSHWHLT |
7 | 2bvbA | 0.14 | 0.12 | 4.29 | 0.83 | Neff-PPAS | | ---KTEIHGDSTKATLEEGQQLTLTFISTKLDVAVGSCHSLVANFLDGFLKFQTGSNSAFDVAVLTIGLGH---KGRLAVVLDYTRLNAAVEDSGCS----SSEEVSFQGVGSGATLVVT |
8 | 6gjeA1 | 0.12 | 0.12 | 4.11 | 0.86 | HHsearch | | NWSQNRTPCAGGAVEFPADKMVLVQEGH-AVSDMLLPDGELVLASGA-GFGVSDVGSHLDCAGEAVFDSDRFSWPHLWRSGDEAGLDAERVPCLGPSPVRV--RSISALGRTFTRDLAV- |
9 | 2qc5A2 | 0.09 | 0.06 | 2.26 | 0.95 | SP3 | | ------LSIPDSGITSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDA--KVMCLIVSSLGDIWFTENGA--NKIGKLSKKGGFTEYPLP---------------------------- |
10 | 5ny0A2 | 0.09 | 0.09 | 3.48 | 0.60 | PROSPECTOR2 | | VSNDIGIHPHTTALTIGNNATLTMENGNNSALNIKLDVDNVRILPYEDSNTANVSTLHAGTGSNLRMGASISDFNGKATFIKDSEFDYYWNTGSTGVANFNPGSNVLFQAGPGASNVNTY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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