Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | TARVILVLDASGSMSFLYSKGIVADVVERMAAVAAQLDDDGEMQAWTFASHPARLPDLTIGDLPDWLRLHVRVGEVGLFYRPGKRKKGLRDDQIDMRSVGIQNEEQKVIAQVRAYVRENPTAAPTLVLFFSDGGVYRNTEIERELRDAVEEPIFWQFVGLGQSNYGVLERFDTLPGRRVDNVGFFAVDDISTVPDPELYDRLLSEFPDWMTAARQAGIL |
1 | 4wfqA | 0.14 | 0.12 | 4.04 | 1.25 | SPARKS-K | | IRSLILTLDCSEAMLEDLRPNRHAMIIQYAIDFVHEFNPISQMGIIIMRNGLAQLVSQVSGNPQDHIDALKSIRK---------------------QEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTTDPDIHQTIDSLVSEKIRVKVLGLSAQV-AICKELCKATNYGDESF-YKILLD------ETHLKELFNEAVTPLPV------- |
2 | 5a8jA1 | 0.12 | 0.09 | 3.21 | 1.64 | FFAS-3D | | GIHYVVMIDNSPSMKKE---NKINLALSSASRLVQDIIPGNFISIYLFSND---------------------------IETLYEGESGKQIELKSIKMGYTTNLHKAITKVLEKF---KSSEIPVKIILLSDGKPTDKRYSRDYESLQVPKNVQLITIGLGEDNEAIMKILADKGSGV-----FYHIND-----PSQLPTTLVEQ-------------- |
3 | 4hqfA | 0.16 | 0.13 | 4.42 | 1.79 | HHpred | | EVDLYLLMDGSGSIRRH---NWVNHAVPLAMKLIQQLNLAIHLYASVFSNNAREIIRLHSDNKEKALIIIKSLL-----STN---------------LPYGKTSLTDALLQVRKHLNDRRENANQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGNVAFNRFLVGCHPSD-GKCNLYADSAWENVK--NVIGPFMKAVCVEVEK------- |
4 | 4hqlA | 0.16 | 0.15 | 4.84 | 1.11 | MUSTER | | QVDLYLLVDGSGSIGY---PNWITKVIPMLNGLINSLRDTINLYMNLFGSYTTELIRLGSGQSID------KRQALSKVTELRKT-----------YTPYGTTSMTAALDEVQKHLNDNREKAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQGNHQFNRLIAGCRPRE-PNCKFYSYADWNE--AVALIKPFIAKVCTEVERVANCGPW |
5 | 4f1jA | 0.16 | 0.13 | 4.42 | 1.33 | CNFpred | | EVDLYLLMDCSGSIRRH---NWVKHAVPLAMKLIQQLNLAIHLYANIFSNNAKEIIRLHSKNKEKALIIIKSLL--------------------STNLPYGRTNLSDALLQVRKHLNDRRENANQLVVILTDGIPDSIQDSLKESRKLNDRGVKIAVFGIGQINVAFNRFLVGCHPSD-GKCNLYADSAWENV--KNVIGPFMKAVCVEVEK------- |
6 | 6fpyA | 0.13 | 0.11 | 3.66 | 0.94 | HHsearch-2 | | NKNVVFVIDISGSMRGQ----KVKQTKEALLKILGDMQPGDYFDLVLFGTRVQSWKGSLVQASEANLQAAQD-----FVR------------GF---SLDEATNLNGGLLRGIEILNQVLSNHASILIMLTDGDPTDRSQILKNVRNAIRGRFPLYNLGFGHNDFNFLEVMSMENNG-----RAQRIYEDHDAT--QQLQGFYSQV-------AK-PLL |
7 | 4hqlA1 | 0.15 | 0.14 | 4.58 | 1.43 | Neff-PPAS | | QVDLYLLVDGSGSIGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTTELIRLGSGQSIDKRQALSKVTELRKTYT-----------------PYGTTSMTAALDEVQKHLNDRVNRAIQLVILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGGINHQFNRLIAGCRPRE-PNCKFYSYADWNEA--VALIKPFIAKVCTEVERVA----- |
8 | 6fpyA2 | 0.13 | 0.10 | 3.50 | 1.34 | HHsearch | | NKNVVFVIDISGSMRGQ----KVKQTKEALLKILGDMQPGDYFDLVLFGTRVQSWKGASEANLQAAQDFVRG---------------------F---SLDEATNLNGGLLRGIEILNQVQSNHASILIMLTDGDPTERSQILKNVRNAIRGRFPLYNLGFGHNDFNFLEVMSMENN-----GRAQRIYEDHDAT--QQLQGFYSQVA------------ |
9 | 4hqfA | 0.15 | 0.12 | 4.18 | 1.53 | PROSPECTOR2 | | EVDLYLLMDGSGSIRRHN---WVNHAVPLAMKLIQQLNLNDHLYASVFSNNAREIHSDASKNKEKALIIIKSLLS--------------------TNLPYGKTSLTDALLQVRKHLNDRINRENQLVVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQGNVAFNRFLVGCHPSD-GKCNLYADSAWENV--KNVIGPFMKAVCVEVEK------- |
10 | 5a8jA | 0.15 | 0.10 | 3.40 | 1.63 | SAM | | GIHYVVMIDNSPSMKKN----KINLALSSASRLVQDIIPGNFISIYLFSNDIETLYEGE-------QIELKSI------------------------KMGYTTNLHKAITKVLEKFKSS--EIPVKIILLSDGKPTDKRYSRDYESLQVPKNVQLITIGLGEDNEAIMKILADKGS-----GVFYHINDPSQL-------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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