Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | VVDANILIRAVLGLRVRLLIADACDRVSFYVAEANYDEAKHYLAELAPARGISEVVWQDALDTLMTAIQLIGQETLSPVEIAAKARIARRDERDWPAVAASLLLDCPIWTEDRDFFGAGVATWTTETISIYL |
1 | 1v8pF | 0.16 | 0.15 | 5.04 | 1.49 | SPARKS-K | | LVDASALYALAAHYDKWIKHREKL-----AILHLTIYEAGNALWKEARLGRVDWAAASRHLKKVLSSFKVLEDPPLDEVLRVAVERG--LTFYDASYAYVAESSGLVLVTQDRELLAKTKGAIDVETLLVRL |
2 | 2fe1A | 0.15 | 0.14 | 4.82 | 1.82 | FFAS-3D | | VVDASAIAALYVPEESEQAERAVSQAQELHTLDLAAYEVANDLWKHARRGLLREDEASNMLEELWEFLKVHSYAEVLKDAFALALK-HGVTVYDAAYVALAEKIGGKLLTLDRQLAEKFPALVT-------- |
3 | 2fe1A | 0.17 | 0.15 | 4.98 | 1.01 | HHpred | | VVDASAIAALYVPEEAERAVSQ---AQELHTLDLAAYEVANDLWKHARRGLLREDEASNMLEELWEALKVHSYAVLKDAFALALKH-G-VTVYDAAYVALAEKIGGKLLTLDRQLAEKALVT---------- |
4 | 1v8pF | 0.16 | 0.15 | 5.04 | 1.41 | MUSTER | | LVDASALYALAAHYDKWIKHREK-----LAILHLTIYEAGNALWKEARLGRVDWAAASRHLKKVLSSFKVLEDPPLDEVLRVAVER--GLTFYDASYAYVAESSGLVLVTQDRELLAKTKGAIDVETLLVRL |
5 | 1v8pA | 0.18 | 0.17 | 5.45 | 1.00 | CNFpred | | LVDASALYALAAHY--DKWIKH---REKLAILHLTIYEAGNALWKEARLGRVDWAAASRHLKKVLSSFKVLEDPPLDEVLRVAVERG--LTFYDASYAYVAESSGLVLVTQDRELLAKTKGAIDVETLLVRL |
6 | 1w8iA | 0.13 | 0.12 | 4.22 | 1.40 | HHsearch-2 | | LIDTGIFFGFYSLKDVAIVVHAEGKWGRLFVTNHILDETLTLLKY---K-K---LPADKFLEGFVGVLNIIYTDDERKALEVFKAREKGFSYTDAISEVVAEELKLKLISYDSRFSLDYWKSLDESERKRIS |
7 | 2fe1A | 0.18 | 0.17 | 5.44 | 1.95 | Neff-PPAS | | VVDASAIAALYVPEERSEQAERAVSQAELHTLDLAAYEVANDLWKHARRGLLREDEASNMLEELWEFFKALKVHSYAEVLKDAFALALKHTVYDAAYVALAEKIGGKLLTLDRQLAEKFPALVT-------- |
8 | 3zvkA | 0.09 | 0.08 | 3.17 | 1.90 | HHsearch | | MLGTNICVYAINKHPYYNNLELLAKNNTIAISSIVLAELQYGVS---KSKK--KEQNQSKLDIFLSRLEIIDFSATFYYGELRTELGLIIGNNDLLIASHAIAENATLVTNNKEFKRPNLILENWDK----- |
9 | 1v96A | 0.09 | 0.08 | 3.17 | 1.13 | PROSPECTOR2 | | TFDSLALIKMH-SQNMKRILEVTLAKFTVNLSIVTVYRYLTA---------RLKKNIEAEFEILKDIYNIVPLLDAAQIEANLIKKEITLDMEDIITATTAIYTNSLLVTDDEPIRRFGLDTMPLDKFIKEV |
10 | 2h1cA | 0.14 | 0.13 | 4.37 | 0.97 | SAM | | LLDTNVISEPLRPQPVVAWLDSL-ILEDVYLSAITVAELRLG---VALLLGKKKNVLHERLEQSILLFRILPFDVAAIYAQIRSYA--KIAAADGYIAATAKQHSLTVATRDGSFFA-DVAVFNP------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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