Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MLESIAGSLYGYIPFGDIVFYMTDFSMIAFVVALFFTIIVALTKPEKQIEAQIGELGDKFNTVSLKEMKARRLMAVICGITTAFAMLTGDVFNFALFLAVIGMANIGIVSAVKKEWVLTAAFNYGIIAMISTLPLFGAASIILAKTGTLSIFELSRHPYDIFYQKILYAVGMVGETGIAPFYAAKAEMFRAPGAPYILMIHLSSLLVIVRTAEILLNI |
1 | 3rkoL | 0.13 | 0.12 | 4.28 | 2.62 | SPARKS-K | | YSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMYASWYM-----RGEEG---------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYDPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHMWATLMLLGGAVGKSAQLPLQTWLADAM-AGPTPVSALIHAAGVYLIARTHGLFLMT |
2 | 4he8M1 | 0.13 | 0.11 | 3.68 | 2.66 | FFAS-3D | | -----------LLPGAGVYFGLDGLSALFFLTIALTVFLGALVA---------------------RVEGRFLGLALLMEGLLLGLFAARDLLVFYVFFEAALIPALLMLYLYGGEGRTRALYTFVLFTLVGSLPMLAAVLGARLLSGSPTFLLEDLQEEAAFWVFLGFALAFAIKTPLFPLHAWLPPFHQE--NHPSGLADALGTLYKVGVFAFFR-- |
3 | 6nbqF | 0.11 | 0.10 | 3.62 | 3.41 | HHpred | | --HLPYTQMIEWAAAGAMGYVIDPLAALMLVIVTTVALVMLYSDGYMAHDP-----------------GYVRFFAYLFGSSMLGLVVSPNLVQVYIFWELVGMCSYLLIGFWYRKSAAEAAQKAFVTNRVGDFGLLLGMVGLFWATGTFDFAGMGDRLSLAAILAILVFLGPVAKSAQFPLHVWLPDAME-GPTP--ISALIAGVFLIARMFPVFEQL |
4 | 4he8L | 0.14 | 0.13 | 4.52 | 1.98 | MUSTER | | LLSGGARFQAEWLPGIPFSLLLDNLSGFMLLIVTGVGFLIHVYAIGYM--------------GGDPGYSRFFAYFNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYNPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMAGP--TPVSALIHAATMVTAGVYLIARSS |
5 | 4he8F | 0.15 | 0.12 | 4.19 | 1.63 | CNFpred | | -----------------FSLLLDNLSGFMLLIVTGVGLIHVYAIGYMGGD---------------PGYSRFFAYFNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYNPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMA-GPTPVSALIHAATMVTAGVYLIARSSF |
6 | 6nbqF | 0.11 | 0.10 | 3.63 | 1.48 | HHsearch-2 | | LFWLPYTQMIEWAAAGAMGYVIDPLAALMLVIVTTVALVMLYSDGYMAHDP-----------------GYVRFFAYLFGSSMLGLVVSPNLVQVYIFWELVGMCSYLLIGFWYRKSAAEAAQKAFVTNRVGDFGLLLGMVGLFWATGTFDFAGMGDRLSLAAILAILVFLGPVAKSAQFPLHVWLPDAME-GPTP--ISALIAAVFLIARMFPVFEQL |
7 | 4he8L1 | 0.14 | 0.13 | 4.52 | 2.49 | Neff-PPAS | | LLSGGARFQAEWLPGIPFSLLLDNLSGFMLLIVTGVGFLIHVYAIGYM--------------GGDPGYSRFFAYFNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYKPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMAG--PTPVSALIHAATMVTAGVYLIARSS |
8 | 4he8L1 | 0.16 | 0.14 | 4.74 | 2.27 | HHsearch | | GASGGARFQAEWLPGIPFSLLLDNLSGFMLLIVTGVGLIHVYAIGYMGGDP-----------------GYSRFFAYLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYNPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMAG-PTP--VSALIAAVYLIARSSFLYSV- |
9 | 4he8L1 | 0.18 | 0.17 | 5.38 | 1.82 | PROSPECTOR2 | | MREPLPGVLAEWLPGIPFSLLLDNLSGFMLLIVTGVGFIHVYAIGYMGGDP-----------------GYSRFFANLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYKPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAMELLALAGLLLFLGAVGKSAQIPLMVWLPDAMA-GPTPVSALIHTAGVYLIARSSFLYSVL |
10 | 4he8L | 0.17 | 0.14 | 4.68 | 2.38 | SAM | | ----------EWLPGIPFSLLLDNLSGFMLLIVTGVGLIHVYAIGYMGGDP-----------------GYSRFFAYLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYNPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAMDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMA-GPTPVSALIHAATMYLIARS------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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