>PF10110 (319 residues) NAWDFLKGTQAYFRDVLLMHGFILFICLPLLSSTTRFILHRGAIDYLSYDNIPSIFSQHP GVLLSLIVVLMMILLLVYFEFTFLLMSVFFIKKKEPISLKQLLHLTILQLKKVRPITFLF FLAYFLLILPISGLSFNSDLLSKIKIPAFIMDFIFANRWIIVSSFLLVYIFLGYIGIRLI FALPEMILRDRPFRAAIRESWSLTKSRLLAITGQFIVIGGTILLLSSLGYIVVILAQSMV EQFFPDYALISAVFAMTLLQGILLFNIVMSTVGIFYIIVDFMDDEGFLPETPKWFIPQAP NLRFSALKNTGLTLFAVFF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | NAWDFLKGTQAYFRDVLLMHGFILFICLPLLSSTTRFILHRGAIDYLSYDNIPSIFSQHPGVLLSLIVVLMMILLLVYFEFTFLLMSVFFIKKKEPISLKQLLHLTILQLKKVRPITFLFFLAYFLLILPISGLSFNSDLLSKIKIPAFIMDFIFANRWIIVSSFLLVYIFLGYIGIRLIFALPEMILRDRPFRAAIRESWSLTKSRLLAITGQFIVIGGTILLLSSLGYIVVILAQSMVEQFFPDYALISAVFAMTLLQGILLFNIVMSTVGIFYIIVDFMDDEGFLPETPKWFIPQAPNLRFSALKNTGLTLFAVFF | |||||||||||||||||||
1 | 3g61A | 0.10 | 0.09 | 3.51 | 1.35 | SPARKS-K | SFWRILKLNSTEFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPETQRQNSNLFSLLIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSLTTRLANDAAQVKGATGSRLAVIFQNIANLGTGIIISLIYG-WQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQENVLLVFSAIVFGAMAVGQVSYAKATVSASHIIRIIEKTPEIDSYS--TQGLKPN-----MLEGNVQFSGVVF | |||||||||||||
2 | 5ogeA | 0.12 | 0.09 | 3.22 | 1.37 | FFAS-3D | --------ILSYCGSSILMTVTVMLFVQSLVCTITLIILRILGFRSLNKTDAKNWF---PISFLLVLMIYTSSKALQYLAVPIYTIFKN---------LTIILIAYGEVLFFGGSVTSMELSSFLLMVLSSV-----------------VATWGDQAVASFNPGYFWMFTNCITSALFVLIMRKRIKLTNFKDFDTMFYNNVLA----LPILLLFSFCSLTAMIISGVASVGISYCSGWCVRVTSSTTYSMVGALNKLPIALSGLILSIFIGFLSGIIYAVAKQKK--------------------------------- | |||||||||||||
3 | 3rkoB | 0.09 | 0.08 | 2.90 | 1.43 | CNFpred | ------------DGLSLTMLSVVTGVGFLIHMYASWYMRGE-----EGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTDPKNGAAAMKAFVVTRVGDVFLAFALFILLMWATLMLLGGAVGKSAQ-LPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT------------------PEVLHLVGIVGAVTLLLAGFAALVQIKRVLAYSTMSQIGMFLALGVQAWDAAIFHLMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRK-------SIPLVYLCFLVGGAAL | |||||||||||||
4 | 6f2gA | 0.10 | 0.10 | 3.70 | 1.13 | Neff-PPAS | -AGIFFKPTAVYGAAGAPGLGLLAWFVAGIITIAGGLTVAEIGTIYPQTGGMMIYLEKVWLGFLVGWAQMVIYYPANIAALAIIFATQFVNLFALSIFLMGVNFLGTKYSGWIQTLATILKLIPLVVIIVAGLLYPGGGVIRLVPFGSALIATLFAYMLPKVIIGGLSIVMAVYLLTNIAYLFVLDSSQLAGTDTPAALVASHLFEGIGSKLVTIGILISVFGGINGYIISGLRVPYALATQKMLGIAIVMILTGQFNQLTDLIVFVIWFFITLTFIAVIILRKTQPDIERP-YRVPFYPVIPLIAIIGGLYIIFNTLI | |||||||||||||
5 | 3wajA1 | 0.07 | 0.07 | 2.84 | 1.22 | PROSPECTOR2 | SIENTIHNGESLRAVLAFIPAIGGVLAILPVYLLTRQFLQRSILGFNDHHIWEAFWRQMAYPVIAGITIGLYVLGFIIAPIILAFMFFAFVLAGFVNADRKNLSLVAVVTSPFQLLVLLGSAVIAAAFYQIEKWNDVGFFERVGLGRKGMPLAVIVLTALIMGLFFVLTNAVLHFGALFFFGMAGIL--------YSAYRFLKRRSFPEMALLIWAIAMFIYYFAAVSAVYSALALSVVFDKLHFRVAFALLIALAAIYPTYILADAQWYDALTGEKYDEYYLQLYPTPQSNKEPFSYPFETYGVISWWDYGHWIEAVA | |||||||||||||
6 | 3wmeA1 | 0.06 | 0.05 | 2.34 | 1.33 | SPARKS-K | TARRIFALAWSSSATMIVIGFIASILEGATLPAFAIVFGRMFQVFTKSKSQIEGETWKYSVGFVGIGVFEFIVAGSRTALFGIASERLARDLRVVEQD-VTYFDELGGKLNNDVQVIQYSFSKLGAVLFNLAQCVVGIIVAFIFAPALTGVLIALSPLVVLAGAAQMIEMSGNTKRSSEAYASAGSVAAEVYETQRYGSKLDPLYRLGRRRYISDGLFFGLSMLVIFCVYALALWWGGQLIARLNLAFFSAILGFMGVGQAAQVWPDVTRGLGAGGELFAMIDRVPQ-------------------------------- | |||||||||||||
7 | 6c3iA | 0.05 | 0.05 | 2.28 | 1.36 | FFAS-3D | ----------ARYGYSLLWVILAANLMAMVIQNLSANLGIASG------RNLPELIREPRPLVWFYWIQAELVAMATDLAEFLGAALAIQLLTGLPMFWGAVVTGVVTFWLLNLPLELAVGAFVLMIGVAYLVQVVLAAVGAGFVPRYLAVGIIGATVMPHVIYLVIAAMGLAGLINMSMLAVAAATFHGKNVETTAYQTLTPLLGPAASVLFAVALLASGLSSSAVGTMAGDVIMQGFMGFHIPLWLRRLITMLPAFVLILSQVILCFGVPFALVPLLLFTARRDVMGA-------LVTRRSFTVIGWVIAVIIIAL- | |||||||||||||
8 | 3rkoC | 0.12 | 0.10 | 3.69 | 1.40 | CNFpred | -------------SIHLAIDGLSLLMVVLTGLLGVLAVLCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLYFLIALWGHASDGKTRITAATKFFIYTQASGLVMLIAILALVFVH-YLLMLGFFIAFAVKMPVHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTG-----SQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWL--------------PALSLFFAVA | |||||||||||||
9 | 5oqtA | 0.08 | 0.08 | 3.11 | 1.10 | Neff-PPAS | IFVLTGVAAAEHAGPALVLSFILSGLACVFAALCYAEFASTVPVSG-SAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLLSGELPKITFLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVKPENWTPFMVATGAATVFFAYRDMPIGIIVSLLVCTLLYIAVSLVLTGIVPYEQLNVKNPVAFALNYIHQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAISRDGLLTGAAVAVFAGIIPLNKLAELTNIGTLFAFITVSIGVLVLRKTQPDLKRAF--RVPFVPVVPILAVLFCGYLVLQ | |||||||||||||
10 | 5oqtA | 0.13 | 0.12 | 4.26 | 1.20 | PROSPECTOR2 | PIQLLMKESGAFVLTGVAAASFILSGLACVFAALCYAEFASTVPVSGSAYTYSYATFGELIAWILGWDLILEYGVASSAVAVGWSGYFQGLLSGELPKALTLLNLGAKKSARFNAVIVAIKVAVVLLFLAVGVWYVKPENWTPFMPYGFSGVATGDMPIGIIVSLLVCTLLYIAVSLVLTGIVPYEQLNVKNPVAFA---LNYIHQDWVAGFISLGAIAGITTVLLVMMYGQTRLFYAISRDGLLPKAVAVFAGIIPLNKLAELTNIGTLFAFITVSIGVLVLRKTQPDLKRAFRVPFVPYGRKHSELN---------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |