Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | SIVIIGGHDRMAGQYKTICKNYNCKAKVFTQMPSNFKNQIGNPDLIILFTNTVSHKMVKCAVNEAKNSNANIIRSHTSSANALKQILEN |
1 | 2kpoA | 0.09 | 0.09 | 3.39 | 0.93 | SPARKS-K | | YVLIISNDKKLIEEARKMAEKANLELRTV-KTEDELKKYLEEFRKVLILVS--NDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKE |
2 | 5c4nD2 | 0.12 | 0.12 | 4.33 | 0.82 | FFAS-3D | | RLLVLGGTTEASRLAKTLADQ-GFEAVFSFGGVAGLVDYLTGVSHVIDATHPFAAQMSANAVAACAQTGVALCAFEVATLEGVMGWLAD |
3 | 4j29A | 0.15 | 0.15 | 4.93 | 0.46 | HHpred | | VVIVVSRDERILEELLEVVLKSDPNVKVRTDDKEKVKEEIQGRPIVIFIRG-ATEEVVRDIVEYAQKEGLRVLVIVDQDQEELERIYEQ |
4 | 2kpoA | 0.09 | 0.09 | 3.43 | 1.03 | MUSTER | | YVLIISNDKKLIEEARKMAEKANLELRTVKTEDKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKE |
5 | 3lkvA | 0.10 | 0.10 | 3.70 | 0.87 | CNFpred | | SIGVVYNAVSLMELLKLSAAKHGIKLVEATAVQSATQAIAEKSDVIYALIDNTVASAIEGMIVAANQAKTPVFGAA---TSYVERGAIA |
6 | 2bisA | 0.15 | 0.15 | 4.89 | 0.26 | HHsearch-2 | | RFIIIGK-GDLEGWARSLEEKHGNVKVITEMLREFVRELYGSVDFVIIPSYF---EPFGLVALEAMCLGAIPIASAVGGLRDIITN-ET |
7 | 2kpoA | 0.09 | 0.09 | 3.43 | 0.93 | Neff-PPAS | | YVLIISNDKKLIEEARKMAEKANLELRTVKTEKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKE |
8 | 5n7zA2 | 0.12 | 0.11 | 3.98 | 0.43 | HHsearch | | QLHIIGD-GSDFEKCQAYSRELGIEVIWYGWQSQVVQQKIKNVTALLLTSAF---EGFPMTLLEAMSYGIPCISSDCMGPRDMIKPGL- |
9 | 4xkjA | 0.09 | 0.09 | 3.39 | 0.76 | SP3 | | KIIMFSVRDDEEAAIREWEKKTGVQVDINRLEDAETAQLTKGYDGIVIQQRSIS---NPAVYETLQKNGLRQLTSRTAGYDMILEQASE |
10 | 2kpoA | 0.09 | 0.09 | 3.43 | 0.62 | PROSPECTOR2 | | MVLIISNDKKLIEEARKMAEKANLELRTVKTEKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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