Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | AFLLPIGLIVWFKRKYGASLKVFFIGALTFFVFAQLLEGGVHLYVLQVNEVTKEAMQHPLWYGIYGCLMAGIFEECGRYLMMRFFMKRHHTWADGLAFGAGHGGLEAILITGLSSISLIVYAFAINSGTFEQLLVNDDVKQALLPIQEQLLHTPSYEWLLGGIERISAIAVQIGLSLLVLYAVKSRRPLFLLYSILLHALFNVPAVLYQRGIVEHAAAVEIIV |
1 | 5a63C | 0.14 | 0.13 | 4.41 | 1.23 | SPARKS-K | | AFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRSDA---RLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADRSPISIRQMAYVSGLSFGIISGVFSVINILADAL-----GPGVVGIHGDSPY---------------YFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEASLLPIYAVTV |
2 | 5a63C | 0.16 | 0.13 | 4.20 | 1.64 | FFAS-3D | | AFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVTDRSDARLQYGLLIFGAAVSV---LLQEVFRFAYYKLLKKADEGLASAYVSGLSFGIISGVFSVINI---------------LADALGPGVV---------GIHGDSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFL---------------- |
3 | 3rkoB | 0.11 | 0.10 | 3.57 | 1.19 | CNFpred | | WATLMLLGGAVGKSAQGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMS-----QIGYMFLALGVQAWDAAIFHLMTHAFFKALLFLAS----GSVILACHHEQNIFKMGGLRKSIPLVYLCFLVGGAALSATAGFFSKDEILAGAMAN-MVAGLVGAFMTSLYTFRMIFIVFH------------ |
4 | 5a63C | 0.16 | 0.14 | 4.63 | 2.81 | HHsearch-2 | | AFGPAFALFLITVAGDPLRVIILVAGAFFWLV-SLLLASVVWFILVHVTDRSD--ARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADSIRQMAYVSGLSFGIISGVFSV----INIL--ADALGPGVVGI------HG------------DSPYYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNPWYEA-SLLPIYAVT |
5 | 5a63C | 0.16 | 0.14 | 4.74 | 2.75 | HHsearch | | AFGPAFALFLITVAGDPLRVIILVAGAFFWLV-SLLLASVVWFILVHVTDRSD--ARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADSIRQMAYVSGLSFGIISGVFSV----INIL--ADALGPGVVG------IHG-----------DSP-YYFLTSAFLTAAIILLHTFWGVVFFDACERRRYWALGLVVGSHLLTSGLTFLNP-WYEASLLPIYAV- |
6 | 4tq3A | 0.13 | 0.12 | 4.22 | 1.01 | SPARKS-K | | CFLLPYAVGFGFGITPNASLQHAVLGLLSFAFWMAFSFTINALYLVTSVREAWLYCIAFLALSLATAAKFFLAMLGANIIGYVYSFKAWPVMDVICNALAAVLAFYAGLSIGYPAAFFLAATFYIPTAGLKNTPVFFGPERALKSLYPLSAITVILWAYVFLMIKVISPLIIAYTLIYTFIINSNVSPNLILTPFGIISALFIAYGFAVISV----------- |
7 | 4cadC | 0.14 | 0.12 | 3.97 | 1.06 | FFAS-3D | | -LMAPFIISTILIAKKKDFINRLFLKTIPVVFLLMPAVILLSILLSIPFGGSISQFQFSFVPVLFLLLLAATFEELGRGYAFDSLQSRYSLFKASILFGIFWSLWHFPLIFVNNSYQYEIFNQ---------------------------------SIWYGLNFFLSILPMGIIITWMCLKN--RKS---IILAIIFHFLINLNQELLAITQDTKIIETGVLF |
8 | 4he8F | 0.13 | 0.12 | 4.19 | 1.15 | CNFpred | | ALAGLLLFLGAVGKSAGPTPVSALIHAATMVTAGVYLIARSSFLYSVLPDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTIS-----QLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLAS----GSVIHALGGEQDVRKMGGLWKHLQTRWHALIGALALGGLLSGFWSKDAILAATLTYPGVGFYVGALLVAVLTAMYAMR--------WFVLVFL |
9 | 4cadC | 0.12 | 0.10 | 3.48 | 1.33 | HHsearch-2 | | GLMAPFIISTILIARLLINLKTIPVVFLLMPAV-ILLSILLSIPFG-GSISQFQFSGGDFVPVLFLLLLAATFEEGWRGYAFDSLQSRYSLFKASILFGIFWSLWHFPLIF--------------VNNSYQYE----------------IFNQSI-------WYGLNFFLSILPMGIIITWMC-LKNRKSIILAIIFHFLINLNQELLAITQD-TKIIETGVL |
10 | 4cadC | 0.13 | 0.10 | 3.59 | 1.26 | HHsearch | | GLMAPFIISTILIARLLINLKTIPVVFLLMPAV-ILLSILLSIPFG-GSISQFQFSGGDFVPVLFLLLLAATFEEGWRGYAFDSLQSRYSLFKASILFGIFWSLWHFPLIF--------------VNNSYQY----------------EIFNQSI-------WYGLNFFLSILPMGIIITWMCLK-NRKSIILAIIFHFLINLNQELLAITQD-TKI-IETG- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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