>PF10065 (275 residues) RSAIELIQQTAIAAAQDMSATSIPTVVLPDNLRIHSLEQYMDHPARFRGRFSTQSIDAFG EYCQSFDGAQIFVDGNAMDAVAIFDLGNPDIPGHAEHTAVVQLKKTAEFQAVEKIDGAKL SQRTMAEWLEDWRHNIVVYEESPFGEDAEKPLPIHQAISRIRSVTIKHVSEQTQEEKEFA SQKTALERIEAQSSGGKLFWGIAFICEPYSEMGERPIFARLTACPGRTEVEMILRISRPE AIQTEIATEFADMITRIFEPMNTEVMNFPVHMGTF |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | RSAIELIQQTAIAAAQDMSATSIPTVVLPDNLRIHSLEQYMDHPARFRGRFSTQSIDAFGEYCQSFDGAQIFVDGNAMDAVAIFDLGNPDIPGHAEHTAVVQLKKTAEFQAVEKIDGAKLSQRTMAEWLEDWRHNIVVYEESPFGEDAEKPLPIHQAISRIRSVTIKHVSEQTQEEKEFASQKTALERIEAQSSGGKLFWGIAFICEPYSEMGERPIFARLTACPGRTEVEMILRISRPEAIQTEIATEFADMITRIFEPMNTEVMNFPVHMGTF | |||||||||||||||||||
1 | 2fuvA2 | 0.09 | 0.07 | 2.75 | 0.70 | SPARKS-K | -NPNHYLAVAINYLFQHRPLWGVAVGKTLVSSAIDRVVNDLG----RKLVEVPVGFKWFVDGLFDG-SFGFGGEESAGASFL----RFDGTPWSTD--------KDLLAAEITAVTGKNP--QEHYNELAARFGAPSYNRLQASATS-----AQKAALSKLSP---------EVSASTLAGDPITARLTAAPGNGAS-----IGGLKVTDN-------GWFAARPSGTEYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA-------------- | |||||||||||||
2 | 3q64A | 0.07 | 0.03 | 1.37 | 0.76 | FFAS-3D | -------------------------------------------------------------------------------------------------ERLYPAPPSKVFFALG-------NADAKRRW----------FTDPDNPPGRFEDFR--------VGGKEVNAGGPKDGPIHVYTATYQ---------DIVPDQRIVYSYDLFGETRISVSLATIQLFAEGEGTRLVLTEHDTPSTREHGTGVLLDLLDAFLDKTTLE----------- | |||||||||||||
3 | 4divA2 | 0.10 | 0.04 | 1.36 | 0.30 | HHpred | ----------------------------------------------------------------------------------------------------------RIFNKYIED-----GKKSWEQFVEANREILESIDPG------GVLLAKVIDIEEKVPAGFKF--VLEHDSE--YQPEKVTSYKNAGTFDS-G--------PVFGGGTIYNVPVSLSY--DRQKVYV--EMPKS------------------------------------ | |||||||||||||
4 | 1pn0C1 | 0.09 | 0.09 | 3.28 | 0.70 | MUSTER | CRTLESLKNLADKILSEANDMSTIALYNPDERRTDRIPDTLPGISRYHQVVLHQGERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETV--GHSWVRRTLGFEMIG------EQTDYIWGVLDAVPASNFPDIRS-----RCAIHSAES------GSIMIIPRENNLVRFYVQLQARVDRTKFTPEVVIANAKKIFHPYTFDVQQLDWFTA-Y | |||||||||||||
5 | 5m3cA | 0.08 | 0.07 | 2.56 | 0.79 | CNFpred | LLFESRLNHALDEAREE----SRPGAVLF--IDLDRFKHINDSLGHPIGDL---LLKAIAERLRDQLDVDTVARLGGDEFIILLPGLHESDA-FVSASVGIALF-GDDAPTLVKN------ADAAMYRAKSRGSRIEYYTR-----ELTYLATERMALETEL-----------------------RRALE--------RDELQLYYQPKLSLLLVGAEALVRWYHPLFGEISFIPLALILPLGDWVLEHACQQMGEWQKL----APFGPLSVNLA | |||||||||||||
6 | 3vepX | 0.15 | 0.02 | 0.61 | 0.32 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------PPLDELARTDREEVDDDALAALLGQWRDDLRWP---------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3tnfB | 0.10 | 0.09 | 3.40 | 0.60 | Neff-PPAS | GKDLEDKYKTYEENLEGFEKLLTDSEELSLSEINEKMEAFSKDSEKLTQLMEKHKLANLQVLHDAHTGKKSYVNEKSLKDAHLAINKDQEVVEHEGQFYLLQIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLESTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSFFN---------EKGEEVTSLNDAHYVIGKNLGGKFYPIHKEQKILEKDGKFYLLKQGEDWESI--KDSPEKQKKAEHDFHKLQYET---PMTVKKL | |||||||||||||
8 | 3mmuA2 | 0.13 | 0.03 | 1.01 | 0.39 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------VTI-------HYYNPFEFT-----HQGA---EW-VEGS------EKWLGRKW-----------GSP--------DDQKHLIEEFNFIEEWSKK---------NKRPIYIGE- | |||||||||||||
9 | 1pn0C1 | 0.09 | 0.09 | 3.28 | 0.62 | SP3 | CRTLESLKNLGLADKILSEANDMSTIALYNGHIRRTDRIPDTLPGISRYHQVVLHERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEICKYVWVRRTLG----------FEMIGEQTDYIWGVLDAVPASNFPDIRS-------RCAIHSAESGSIMIIPR----ENNLVRFYVQLQARVDRTKFTPEVVIANAKKIFHPYTFDVQQL-DWFTAY | |||||||||||||
10 | 1utea | 0.07 | 0.06 | 2.51 | 0.73 | PROSPECTOR2 | PTHTAREMANAKAIATTVKTLGADFILSVHDAKDKRFQETFEDVFSDPSLRNVGNVSAQIAYSKISKR----WNFPSPYYRLRFKIPRS------NVSVAIFMLDTVTLCGNSDDFVSQQPARTQLAWIKKQLAAAKEVWSIAEHGPTHCLVKQLLPLLTTHKVTALQYLQDENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYEMSVTYIEASGKSLFKTKLPRRA----------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |