Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | MAALRSEVKAYIVQALACFDTPSQVAEAVKTEFGIVITRQQCESHDPTKYAGKGLAQKWADLFHECRKRFREETADIPIANRAYRLRALGRMAEKAENMKNMA |
1 | 5cwcA1 | 0.15 | 0.13 | 4.26 | 0.81 | SPARKS-K | | --SEKEELRERLVKICVENDDTEEAREAAREAFELEAAERA----------GIDSSEVLELAIRLIKECVENAQREI-SEACRAAAEAFKRVAEAAKRAGI-- |
2 | 5unfA1 | 0.14 | 0.14 | 4.61 | 0.74 | FFAS-3D | | -ADLEDNWETLNLKVIEKADNAAQVKDALTK---MRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRN-- |
3 | 3hefB | 0.10 | 0.09 | 3.21 | 0.32 | HHpred | | PSDYMPEVADDICSLLSSGESLLKVCKR------PGMDKSTVFRWL-------AKHEDFRDKYAKATEARADSIFEIAVAKARLRVDTRKWALARMNKYGD-- |
4 | 5tgwA | 0.21 | 0.19 | 6.18 | 0.75 | MUSTER | | FEKL-RQTGDELVQAFQRLDSLEQVLEEIEELI-----QKHRQLFDNRQEAADTEAAKQGDQWVQLFQRFREAIDKGDKDSLEQLLEELEQALQKIRELAEKK |
5 | 5a69A | 0.10 | 0.09 | 3.25 | 0.56 | CNFpred | | -------YLFETQAQLNAILSKVDVGRRIRQAYQA--DKESLQQIARQE--LPELRSQIEDFHALFSHQWLKENKVFGLDTVDIRMGGLLQRIKRAESRIEVY |
6 | 1iufA1 | 0.14 | 0.10 | 3.29 | 0.48 | HHsearch-2 | | MGAITEHEKRALRHYFQLQSGQQDLIEWFREKFGKDISQPSVSQI-------------LS-----SKYSYLDNTVEKPWDVKRNRPP---------------- |
7 | 5cwoA1 | 0.15 | 0.15 | 4.87 | 0.63 | Neff-PPAS | | -----PELEEWIRRAKEVAKEVEKVAQRAEEEGNPDLRDSAKELRRAKKQGNPELVEWVARAAKVAAEVIKVAIQAELFRAALELVRAVIEAIEEAVKQGNP- |
8 | 5unkA | 0.09 | 0.05 | 1.87 | 0.66 | HHsearch | | SMVLSPRDERTLVRKVQIRTTAKDLVKMLE-ETGTKVSISTVKRVLYR--HNLKGSARKLE------------------------------------------ |
9 | 1iufA | 0.11 | 0.11 | 3.88 | 0.79 | SP3 | | RRAITEHEKRALRHYFFQLQGQQDLIEWFREKFGKDISQPSVSQILKPWDVKRNRPPKYPLLEAALFEWQVQQGDDATLSGETIKRAAAILWHKIPEYQDQPV |
10 | 5cwpA1 | 0.13 | 0.13 | 4.41 | 0.53 | PROSPECTOR2 | | MSSDEEEARELIAQEAAERTGDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|