Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | MTKLKLGPLPDDKPVKVTVELPAPLHRDLVAYAEVLARETGQPVADPVKLIVPMLERFIATDRGFAKARR |
1 | 1p94A | 0.12 | 0.10 | 3.50 | 1.02 | HHsearch | | VKKMTVAPVSSGKIKRVNVNFDEEKHTRFKAACARKG-------TSITDVVNQLVDNWLKENE------- |
2 | 2kelA | 0.11 | 0.07 | 2.59 | 1.15 | SP3 | | -----------KQKAVFGIYMDKDLKTRLKVYCAKNN-------LQLTQAIEEAIKEYLQKRNG------ |
3 | 5cwfA2 | 0.10 | 0.10 | 3.70 | 0.81 | SPARKS-K | | DEMAKVMLALAKAVLLAAKNNDDEVAREIARAAAEIVEALRENNSEMAKKMLELAKRVLDAAREIARQAA |
4 | 4zhjA3 | 0.14 | 0.09 | 2.94 | 0.49 | FFAS-3D | | --------------------LPVEKAQDARNFMLSFQYWLGGSQENLENFLLMLTDKYVYPDLG------ |
5 | 1p94A | 0.12 | 0.09 | 3.06 | 0.49 | HHpred | | ----VTAPVSSGKIKRVNVNFDEEKHTRFKAACARKG-------TSITDVVNQLVDNWLKENE------- |
6 | 5tnuA | 0.14 | 0.14 | 4.86 | 0.62 | MUSTER | | VEELAGKYIAKYKIKKLYVSLTNEEKKRYDGLRKKLKDFLSSRGLKLNLDDFHRLVKLAAKDKEAREALL |
7 | 4znmA | 0.08 | 0.06 | 2.26 | 0.47 | CNFpred | | -------------TAWQRFAVRGELADAVVEFSRAAK-------CSPFMTMFAAYQVLLHRRTGELDITV |
8 | 1p94A | 0.14 | 0.11 | 3.89 | 0.61 | HHsearch-2 | | SVKMTFGPVSSGKIKRVNVNFDEEKHTRFKAACARKG-------TSITDVVNQLVDNWLKENE------- |
9 | 3vibA2 | 0.15 | 0.13 | 4.31 | 0.74 | Neff-PPAS | | ------QDLADD----LDKETAVIFIKSTLDGLIWRWFSSGESF-DLGKTAPRIIGIMMDNLENHPCLRR |
10 | 2kelA | 0.11 | 0.07 | 2.59 | 0.87 | HHsearch | | -----------KQKAVFGIYMDKDLKTRLKVYCAKNN-------LQLTQAIEEAIKEYLQKRNG------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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