>PF10022 (350 residues) TRSDFQDGCVALLDPLVPHFTPGSSRVKIGTSTTRFDEGAAQIEGFARPLWGLGALLAGG YEYSEAERWRQGIINGTDPEHPEFWGEIEDLDQRMVEMCPIGFALAVAPDELWNPLTDKQ KDNVAKWLGSINEREMPNTNWLWFRVFANLGLRKNGAAYSLKRIEADMDHLDTFHVGGGW SNDGPKSHHQMDYYSGSFAIQFLQLLYSKLAGDFDPERAERYRNRAKEFAKDFVHYFDKD GRAIPFGRSVTYRFAMAGFWGAVAFADVELPAPLTWGVVKGLLLRNFRWWATQEDIFNSD GTLTLGYCYANMYLTENYNSPGSPYWCCLSFTPLALPESHPFWAAAEEPY |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TRSDFQDGCVALLDPLVPHFTPGSSRVKIGTSTTRFDEGAAQIEGFARPLWGLGALLAGGYEYSEAERWRQGIINGTDPEHPEFWGEIEDLDQRMVEMCPIGFALAVAPDELWNPLTDKQKDNVAKWLGSINEREMPNTNWLWFRVFANLGLRKNGAAYSLKRIEADMDHLDTFHVGGGWSNDGPKSHHQMDYYSGSFAIQFLQLLYSKLAGDFDPERAERYRNRAKEFAKDFVHYFDKDGRAIPFGRSVTYRFAMAGFWGAVAFADVELPAPLTWGVVKGLLLRNFRWWATQEDIFNSDGTLTLGYCYANMYLTENYNSPGSPYWCCLSFTPLALPESHPFWAAAEEPY | |||||||||||||||||||
1 | 5noaA | 0.10 | 0.09 | 3.21 | 1.28 | SPARKS-K | SSAEVVDIIHKVNGYWQTNHPEHGR----------------SFWDNAAYHTGNMEAYFLTNKPEYLEYSKGWAEHGAKSDHKANWKYESNDYVLFGDYQICFQTYADLYNL-----DTHKIARAREVMEYQMSTPWWWADGLYMVMPVMTKLYNITNPLYLEKLHEYLAYADSIMYDAGLYYRSVNGKKDFWARGDGWVLAGLAKVLKDLPETD--KYRQEYIDRFRTLAKSVAACQQPEGYWTRSHAPGPETSGTAFFTYGLQWGVNNGF--LDSAHYQPVVEKAWKYLSTV--ALQPDGKIG--YVQPIGEVDANSTSNGAFLLAACERVRYLESLIQH--------- | |||||||||||||
2 | 3gt5A | 0.10 | 0.09 | 3.41 | 1.11 | FFAS-3D | SADFLRTHISDTMAFYHPRCIDSAGGFYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGTAEYLDAVHHGLSVHRNPATGGYADRVEDDTNHCYGLAFVMLAYSCGLK-VGIKQAREWMDETWCLLERHAQWNFTRYRGQNANMMCEAMLAAYEASGEQRYLERALVLADRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVARSWYGFAPDGTICDDDKYFVQAESLAAAALLATRSGDE----RYWQWYDRLWAYAWQHMVDH-----RYGAWYRLLDGDNRKYNDEKSPAGTDYHTMGACHEVL----NVVWT------ | |||||||||||||
3 | 6f2pA | 0.13 | 0.11 | 3.80 | 0.42 | HHpred | SDPDIAARVNAITQGYWDSMLKDPNRNRLNDAPFG-SDSTSITTTYRHLYDMALAYTTYGSSAALKADIISGLDWMNYSQYQNWWHQIG-----------GPMALNDIVALMYTELTATQISNYMAAIYYTQASMTGANLWESQVIAISGILN-----KDSARVAAGRDGISALLPGDGFYNDGSF-VQHTYAYNGGYGSELLSDLIFILNGSSWQ-VTDPNKNNVYRWIYSYEPFI-YKGNDMVRGREISRHGLVTVMASIIRLSQ-----TAAS-ADATAFKRMVKYWLLLD-TD-K-T-----FL-KA-------VSIDL-IIAANQLVNSTVTSRGQFSGMD---- | |||||||||||||
4 | 5noaA | 0.09 | 0.08 | 2.98 | 1.02 | MUSTER | SSAEVVDIIHKVNGYWQTNH---------PEHGRSF-------WDNAAYHTGNMEAYFLTNKPEYLEYSKGWAEH-AKSDHKANWKYESNDYVLFGDYQICFQTYADLYNL-----DTHKIARAREVMEYQMSTPNNDYWWADGLYMVMPVMTKLYNITKNPLYLEKLHEYLAYADEAGLYYRDVNGKKDFWARGDGWVLAGLAKVLKDLPETD--KYRQEYIDRFRTLAKSVAACQQPEGYTRSMLDAQHAPETSGTAFFTYGLQWGVNNGFLDSAHYQPVVEKAWKYLSTV--ALQPDGKIGIGEAIPGQVVDANSTSNGAFLLAACERVRYL-LIQH---------- | |||||||||||||
5 | 5noaA | 0.11 | 0.09 | 3.43 | 1.29 | CNFpred | SSAEVVDIIHKVNGYWQTNHP----------------EHGRSFWDNAAYHTGNMEAYFLTNKPEYLEYSKGWAWKGAKSDHKANWKYSYGDYVLFGDYQICFQTYADLYNLEPDTHKIARAREVMEYQMSTPNDYWWWADGLYMVMPVMTKLYNITNPLYLEKLHEYLAYADSIMYDAGLYYRDGKYVKDFWARGDGWVLAGLAKVLKDLP----DKYRQEYIDRFRTLAKSVAACQQPEGYWTRSMLDAGPETSGTAFFTYGLQWGVNN-GFLDSAHYQPVVEKAWKYLST--VALQPDGKIG-----YVQPIGE-VDANSTSNFGVGAFLLAACE------------- | |||||||||||||
6 | 3a0oA3 | 0.14 | 0.12 | 4.07 | 0.77 | HHsearch-2 | NSEQLSAFADAVAKPVEPWLERPV--MPEPQ---PYPNNRQMYEVIYAIRHLAIAGRVLGR-DDLLDASRKWLLAVADTK-----G---ATSRAYNDEARVVVALAWGYDWLYDHLSEDERRTVRSVLLERAHAVFPYDAVRSLAVLTPACIALQGESEAGEWLDYTVEFLATLYSTDGGWAEGP------H-YW-MTGMAYLIEAARSYIGY-DL--YQ--RPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPLGVRQFAGVTG--------NGHYQWYFDHIKAD---ATGT--EMAFYNYGWWD-------------------LNFDDLVYRHDYPVEAVSPADL | |||||||||||||
7 | 4c1sA | 0.11 | 0.10 | 3.62 | 1.18 | Neff-PPAS | -ADRAHSYMTSVIGYYFGKSSRSCWRSNYPYDGKGYWDGDALVWGQGGGLSAFVAMRDATKESAMDDMMFKGIQYFCQRGILAYSCYAAGNERFYDDNVWIGLDMVDWYTETKEMRYLTQAKVVWRYLIDHGWDETCGGSTGPTAVMGCKMYLATQEQEYLDWAIKCYDYMLDVLQDDHLFYDNGDLEKNKYSYNSGQPLQAACLLYKITGE-------QKYLDEAYAIAESCHKKWFMPYNILAPGHAWFNTIMCRGFFELYSIDN--------DRKYIDDIEKSMIHAWSS-SCHQGNNLLNDDDLRGGTT--KTGWEILHQGALVELYARLAVLERENR-------- | |||||||||||||
8 | 3a0oA3 | 0.13 | 0.11 | 3.68 | 1.22 | HHsearch | NSEQLSAFADAVEKSVEPWLERPVM--PEPQPYPNNTRVRQMYIVIYAIRHAIAGRVLG--RDDLLDASRKWLLAVADTK-----G---ATSRAYNDEARVVVALAWGYDWLYDHLSEDERRTVRSVLLERAHAVFPYDAVRSLSVLTPACIALQGESEAGEWLDYTVEFLATLYSTDGGWAEGP------H-YW-MTGMAYLIEAARSYIGY-D--LYQ--RPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPLGVRQFAGVTGN--------GHYQWYFDHIKAD---ATGT--EMAFYNYGWWDLN----------------FDDLVYRDYPAVSP------AD- | |||||||||||||
9 | 4c1sA | 0.11 | 0.10 | 3.62 | 1.11 | PROSPECTOR2 | SH--MADRAHSYMTSVIGYYFGKSSRSNYPYDGKGYWDGDALVWGQGGGLSAFVAMRDATKESAMDDMMFKGIQYFCQLDRGISCYPAAGNERFYDDNVWIGLDMVDWYTETKEMRYLTQAKVVWRYLIDHGNEHTTSKHSCSTGPTAVMGCKATQEQEYLDWAIKCYDYMLDVLQDKSDHLNKDDPNLPGDLEKNKYSYNSGQPLQAKITGE------QKYLDEAYAIAESCHKKWFMPYRSKELNHAWFNTIMCRGFFELYSIDNDR--------KYIDDIEKSMIHAWSSSCHQGNNLLNDDDLRGGTTK---TGWEILHQGALVELYARL--------AVLERENR | |||||||||||||
10 | 3a0oA | 0.14 | 0.07 | 2.53 | 0.51 | SAM | ---------------------------------------------VIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAA------WDTKGATSRAYNDEARVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVFPYDSHAVRSALTPACIALQGEDEAGEWLDYTVEFLATLYSTDGGWAEGP----YWMTGM-AYLIEAANLIRSYIGYDL----YQ--RPFFQNTGRFPLYTKAPGTRRANFG------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |