Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ILKDKRMLEILKHLKKANVDYGKSIMLNTKIPIQEVVDLLDKLEKIGLIERVHGATLKNTEAKFKLSKEVHKHHTYYKLTREGDHLLRQL |
1 | 4rs8A | 0.26 | 0.21 | 6.51 | 1.74 | SPARKS-K | | YIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWLLAEGYVVKEQKG-----------------EEIYYKLTDKGKQMATAE |
2 | 5ywjA | 0.15 | 0.12 | 4.11 | 1.29 | FFAS-3D | | ---SLNDLAVLDLTMKHCKDELKTAMDELDLSRTKLLVSIRRLIEKERLSKVRSSKDERK--------------IYIYLNNDDISKFNAL |
3 | 3bddA | 0.18 | 0.16 | 5.04 | 1.17 | HHpred | | LGISLTRYSILQTLLKDAPLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNP--------------DNQREVLVWPTEQAREALITN |
4 | 4rs8A | 0.26 | 0.21 | 6.51 | 1.57 | MUSTER | | YIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWLLAEGYVVKEQKG-----------------EEIYYKLTDKGKQMATAE |
5 | 2fbiA | 0.14 | 0.12 | 4.14 | 1.13 | CNFpred | | HGLTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAP--------------KDQRRVYVNLTEKGQQCFVSM |
6 | 1jgsA | 0.18 | 0.16 | 5.04 | 0.45 | HHsearch-2 | | LDITAAQFKVLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNP--------------NDKRGVLVKLTTGGAAICEQC |
7 | 4rs8A | 0.26 | 0.21 | 6.51 | 1.37 | Neff-PPAS | | YIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWLLAEGYVVKEQKG-----------------EEIYYKLTDKGKQMATAE |
8 | 3bddA | 0.19 | 0.16 | 5.03 | 0.71 | HHsearch | | LGISLTRYSILQTLLKDAPLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNP--------------DNQREVLVWPTEQAREALIT- |
9 | 4rs8A | 0.26 | 0.21 | 6.51 | 0.93 | PROSPECTOR2 | | YIFLTPRAYIIVHLLKVGKAKASEISENTQIPYQTVIQNIRWLLAEGYVVKEQ-----------------KGEEIYYKLTDKGKQMAEVV |
10 | 2frhA | 0.11 | 0.09 | 3.22 | 1.03 | SAM | | --ISFEEFAVLTYISENKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNE--------------HDERTVLILVNAQQRKKIESL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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