Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | INVQEIEPRLRHLTIFQAFDSLEEGESLVIHNNHDPKPVYYQLARLRGEVFDWEYLEAGPEWWDVKVTK |
1 | 1dcjA | 0.09 | 0.09 | 3.33 | 2.33 | SPARKS-K | | LDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPA-TTRDIPGFCTFMEHELVAKETDGLPYRYLIRK |
2 | 1dcjA | 0.12 | 0.12 | 4.12 | 1.14 | FFAS-3D | | LDALGLRCPEPVMMVRKTVRNMQPGETLLIIAD-DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK |
3 | 1pavA | 0.10 | 0.10 | 3.72 | 1.08 | HHpred | | IDARGSYCPGPLMELIKAYKQAKVGEVISVYST-DAGTKKDAPAWIQKSGQELVGVFDRNGYYEIVMKK |
4 | 1dcjA | 0.10 | 0.10 | 3.72 | 2.75 | MUSTER | | LDALGLRCPEPVMMVRKTVRNMQPGETLLIIADD-PATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK |
5 | 3lvjC | 0.09 | 0.09 | 3.32 | 1.07 | CNFpred | | LDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPTTRDIPGFCTFM--EHELVAKETDGLPYRYLIRK |
6 | 1jdqA | 0.15 | 0.14 | 4.90 | 1.62 | HHsearch-2 | | LDVRGEVCPVPDVETKRALQNMKPGEILEVWID-YPMSKERIPETVKKLGHEVLEIEEGPSEWKIYIKV |
7 | 1dcjA | 0.10 | 0.10 | 3.72 | 2.30 | Neff-PPAS | | LDALGLRCPEPVMMVRKTVRNMQPGETLLIIADD-PATTRDIPGFCTFMEHELVAKETDGLPYRYLIRK |
8 | 1dcjA | 0.09 | 0.09 | 3.32 | 2.74 | HHsearch | | LDALGLRCPEPVMMVRKTVRNMQPGETLLIIADD-PATTRDIPGFCTFMEHELVAKETDGLPYRYLIR- |
9 | 1dcja | 0.09 | 0.09 | 3.33 | 0.82 | PROSPECTOR2 | | LDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPA-TTRDIPGFCTFMEHELVAKETDGLPYRYLIRK |
10 | 1jdqA | 0.15 | 0.14 | 4.90 | 0.89 | SAM | | LDVRGEVCPVPDVETKRALQNMKPGEILEVWID-YPMSKERIPETVKKLGHEVLEIEEGPSEWKIYIKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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