Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | WFLLALIVPALLVILFTRVTYNHYVGTLLTVALLVASYVKGYTDQLYEIVADIASLIVGFLYAKRMVEKQKQ |
1 | 5xj5A2 | 0.18 | 0.17 | 5.44 | 1.10 | SPARKS-K | | SVALFSFLVWLGIFLWKR--YVSLASITATISAFLFLFVAGYPVNVLFMAIVIGALIIYRH--RENINRLLT |
2 | 5xj5A2 | 0.07 | 0.07 | 2.83 | 1.07 | Neff-PPAS | | SVALFSFLVWLGIFLWKR---YVSLASITATISAFLFLFVAGYPVNVLFMAIVIGALIIYRHRENINRLLTG |
3 | 5ogeA2 | 0.14 | 0.14 | 4.75 | 1.04 | SPARKS-K | | MELSSFLLMVLSSVVATWSTTYSMVGALNKLPIALSGLIFFDAPRNFLSILSIFIGFLSGIIYAVAKQKKQQ |
4 | 3jadA2 | 0.17 | 0.17 | 5.50 | 0.81 | FFAS-3D | | YYLIQMYIPSLLIVILSWVSFGLGITTVLTMTTQSSGSRVSYVKAIDIWMAVCLLFVFSALLEYAAVNFIAR |
5 | 3rceA1 | 0.23 | 0.21 | 6.53 | 0.24 | HHpred | | ---LVLVLPMLILLTFIRLTINKDIFTLLLSPIFI-MIYLWWYPSSYSLNFAMIGLFGLYTLVFH--RKEK- |
6 | 3gi9C | 0.12 | 0.12 | 4.38 | 0.85 | MUSTER | | FMVIYLFVILSHYILIDEVKEIVIFSFIVVLGVFLLLLYYQWITNRFVFYGIIATFIGVLIFEIIYRKVTKR |
7 | 5ldwL | 0.06 | 0.06 | 2.50 | 0.73 | CNFpred | | LGAITTLFTAMCALTQNDIKKIIAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFMCSGSIIHSLN |
8 | 6bugC | 0.13 | 0.12 | 4.32 | 0.40 | HHsearch-2 | | IYLGIALLPIFIGLFFKK-RFA-IYECLVSITFIV-LAL-TGTQILALLFYIVWQIIWVYSYKRYRSQRDNK |
9 | 3rceA4 | 0.10 | 0.10 | 3.58 | 0.93 | Neff-PPAS | | ---VLVFILSFIGFILLCKDHKSMLLALPMLALGFMALRAGLRFTIYAVPVMALGFGYFLYAFFNFLEKKQI |
10 | 6bugC1 | 0.12 | 0.11 | 3.93 | 0.54 | HHsearch | | IYLGIALLPIFIGLFFKK-R-FAIYECL--VSITFIVLALTGSQILALLFYIVWQIIWVYSYKRYRSQRDN- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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