Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | ILHLSSGGVALAADTGRIIIRNDLAACVDMRVEKPPFEYSNGSNIVAINANFKLRKPIGACGCMSALARYASSVNERESRLFLQQGLFNLKKSDTKTLPLATEPALVKDGNIEITVGCARP |
1 | 4b9gA | 0.08 | 0.07 | 2.91 | 0.67 | SPARKS-K | | RIIPVNYDSDPKLNSQLYTVEMTIPSAVKIVPTD----SLTSSGQQIGKLVNVNNPD--------QNMNYYIRKDSGAGFMAGQKGSFSVKENTSYTFSAIYTGGEYPNGHLTVSFYSNDN |
2 | 2n59A | 0.13 | 0.08 | 2.88 | 0.49 | FFAS-3D | | -----------------------MVQC--------EVEAAVSGGHVTLQGVITAVRDGA--------GSYKLAVGAAGTSRIKQAGAFTAIAEQRVTVGNVV-LDYSSANRYAARLQCN-- |
3 | 2n59A | 0.15 | 0.10 | 3.34 | 0.30 | HHpred | | ---------------------------------QCEVEAAVSGGHVTLQGVITAVRDG--------AGSYKLAVDAAGTSRIKQAGAFTAIAEQRVTVGLDYSSANRYAARLDVTIQCNLD |
4 | 3s6pA | 0.09 | 0.09 | 3.45 | 0.66 | MUSTER | | FVWAGLPQGGTAPAGTPAWEQASSGGYLTWRHNGTTFPAGSVSYVLPEGFALERYDPNDGSWTDFASAGDTVTFRQVAVDEVVVTNNPAGGGSAPTFTVRVPPSNAYTNTVFRNTLLETRP |
5 | 6fb3A | 0.04 | 0.03 | 1.69 | 0.84 | CNFpred | | ---------------GTLRVMYANGMSISFHSEPH-------LAGTVTPTIGRCNISLP-MENGLNSIEWRLRKEQIKGKVTVFGRKLRVH--GRNLLSIDYDEKIYDDRKFTLRIIYDQL |
6 | 2n59A | 0.13 | 0.09 | 3.13 | 0.53 | HHsearch-2 | | ---------------------------MVQCEVEAA----VSGGHVTLQGVITAVRDG--------AGSYKLAVDAAGTSRIKQAGAFTAIAEQRVTVGLDYSSANRYAARLDVTIQCNLD |
7 | 2zahC2 | 0.12 | 0.12 | 4.12 | 0.82 | Neff-PPAS | | MVCMFDRLVSFSEVGSTIKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNAT-SIGSLTFTGNSKLVGNSLNVTSSGASALTFTLNSTGVPNSSNSSFSVGTVVALTRVRMTITRCSP |
8 | 2n59A | 0.15 | 0.10 | 3.35 | 0.54 | HHsearch | | -------------------------------MVQCEVEAAVSGGHVTLQGVITAVRDG--------AGSYKLAVDAAGTSRIKQAGAFTAIAEQRVTVGLDYSSANRYAARLDVTIQCNL- |
9 | 4aq1A3 | 0.08 | 0.07 | 2.94 | 0.70 | SP3 | | -------EVPVQVQNQGFTLVDNLSNAPQVAFNKAEKVTSMFAGETKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINELLVTANAGQSGKASFEVTFKDNTKRTFTVDVKKEP- |
10 | 4aq1A3 | 0.10 | 0.09 | 3.39 | 0.60 | PROSPECTOR2 | | -------EVPVQVQNQGFTLVDNLSNAPQNTVAKAEKVTSMFAGETKTVAMYDTKNGDPETKPVDFKDATVRSLNPIIATAAINELLVTANAGQSGKASFEVTFKDNTKRTFTVDVK-KEP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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