Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KLERLMKLKGAVAAGKYTMDGKLAEYKGNLPKEMAEMVAMMCAANTMMGRMQAEGFSKFSGMKWSPFHGWAVAAGDYAVCVMGQYGVFVEMAKADFNEIFKTLM |
1 | 1skoA | 0.16 | 0.14 | 4.81 | 1.17 | SPARKS-K | | LYKKLPSVEGLHAIVVSDRDGVPVIKVANAPEHALR---------PGFLSTFALATDQGSKLGLSKNKSIICYYNTYQVVQFNRVVSFIASSSANTGLIVSLEK |
2 | 1skoA | 0.16 | 0.14 | 4.81 | 1.15 | Neff-PPAS | | FLYKKLPVEGLHAIVVSDRDGVPVIKVANAPEHALR---------PGFLSTFALATDQGSKLGLSKNKSIICYYNTYQVVQFNRVVSFIASSSANTGLIVSLEK |
3 | 1j3wB | 0.17 | 0.15 | 5.07 | 1.10 | HHsearch | | VLEETLRETGARYALLIDRKGFVLAHAPKPP--PLDTLATLVAGNAAATQALAKLLGE------ARFQEEVHQGERMGLYVDEHLLVLVFDETAPLGKVKLHG- |
4 | 1j3wB | 0.18 | 0.16 | 5.34 | 0.86 | SPARKS-K | | VLEETLRETGARYALLIDRKGFVLAHKEKPPP--LDTLATLVAGNAAATQ---ALAKLL-GEA--RFQEEVHQGRMGLYVDEAGLLVLVFDETAPGKRASEALA |
5 | 1skoA | 0.14 | 0.12 | 4.29 | 0.85 | FFAS-3D | | -LYKKLSVEGLHAIVVSDRDGVPVIKVANDNAPEHALRPGFLSTFALATD-------QGSKLGLSKNKSIICYYNTYQVVQFNRVVSFIASSSANTGLIVSLE- |
6 | 3kyeB | 0.17 | 0.15 | 5.07 | 0.50 | HHpred | | WLSGLVRVPHTTSAVLLSCDGLVKSVHG-LDPDSADH-AALASGLYSLGRSAGIRFGDG-----GDVRQVVVELDSTLLFVSTGTCAVLAGREADAAVLGYE-- |
7 | 1j3wB | 0.16 | 0.15 | 5.09 | 0.79 | MUSTER | | VLEETLRETGARYALLIDRKGFVLAHKEAPKPPPLDTLATLVAGNAAATQALAKLLGE------ARFQEEVHQGERMGLYVDE-LLVLVFDETAPLGKVKLHGK |
8 | 3kyeA | 0.15 | 0.14 | 4.84 | 0.75 | CNFpred | | LMSGLVRVPHTTSAVLLSCDGLVKSVHG-LDPDSADHMAALASGLYSLGRSAGIRFGDGG-----DVRQVVVELDSTLLFVSTTCLAVLAGREADAAVLGYEMA |
9 | 1j3wB | 0.17 | 0.15 | 5.08 | 0.74 | HHsearch-2 | | VLEETLRETGARYALLIDRKGFVLAHAPKPP--PLDTLATLVAGNAAATQALAKLLGE------ARFQEEVHQGERMGLYVDEHLLVLVFDETAPLGKVKLHGK |
10 | 3leqA | 0.14 | 0.12 | 3.91 | 1.02 | Neff-PPAS | | -LTGLVDVAEVDHAVVLSEDGLVVSKSTGFLRDDAERLAATASGLS--------------------LRQALIEGKGYLILTAAGHLVVLTRQGADVGVVAYQNL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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