>PF09887 (453 residues) PYFIVASVEVGNTTTKCILTATNLEDGKTRLVSKIVSMTRDVRPPKEGEEVFGRTLNGVE LTRQSVAEMVRDTLLRAVKQSNLDIKEDIHFVVRSTGVVAGFDTPDEVGEFIKALADGCL MAGVPPNRMTPPMGMSNVPERFRKHTKLEQVVFDGAVASVTPPTGATGVEIVANEMEGEL ATAGIKEGAKWVDIDFRNPCISIDFGTTLDGRVISPDLPYAKTIGNFCGYAGAIPDAIIK GTGLVDSKKGTALDVADKTSLDMFTLKMKGKAIKEYAERIHEHIQIERVPKDRKRYGSVP VNSEAADSIGVVLIGCDVGNNGTDMDKLSEIGAEIYQKHNLKTLFAVIDEVMAKVVQRLV KVAQEEGLVFEDTVIGITGRAGITGAKPRLILQYLHELGINNKIEENVVFVDDGLARGAA VMARCMNSMGTSFNPLGGHRGGKCILGQRIKLQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PYFIVASVEVGNTTTKCILTATNLEDGKTRLVSKIVSMTRDVRPPKEGEEVFGRTLNGVELTRQSVAEMVRDTLLRAVKQSNLDIKEDIHFVVRSTGVVAGFDTPDEVGEFIKALADGCLMAGVPPNRMTPPMGMSNVPERFRKHTKLEQVVFDGAVASVTPPTGATGVEIVANEMEGELATAGIKEGAKWVDIDFRNPCISIDFGTTLDGRVISPDLPYAKTIGNFCGYAGAIPDAIIKGTGLVDSKKGTALDVADKTSLDMFTLKMKGKAIKEYAERIHEHIQIERVPKDRKRYGSVPVNSEAADSIGVVLIGCDVGNNGTDMDKLSEIGAEIYQKHNLKTLFAVIDEVMAKVVQRLVKVAQEEGLVFEDTVIGITGRAGITGAKPRLILQYLHELGINNKIEENVVFVDDGLARGAAVMARCMNSMGTSFNPLGGHRGGKCILGQRIKLQ | |||||||||||||||||||
1 | 2ivnA | 0.12 | 0.08 | 2.79 | 1.03 | CNFpred | --MLALGIEGTAHTLGIGIVSED-----KVLANVFDTLTTEKGGIH------------PKEAAEHHARLMKPLLRKALSEAGVSL-DDIDVIAFSQGP----GLGPALRVVATAARALAVKY---------------------------------------------KPIVGVNHCIAHVEITKM---------GVKDPVGLYVSGGNTQVLALEG--GRYRVFGETLIGIGNAIDVFAR-----------ELGLGF----------PGGPKVEKLAEKGEKYIELPYAVK--MDLSFS-----------------------GLLTEAIRKYRSG--KYRVEDLAYSFQETAFAALVEVTERAVAHT---EKDEVVLVGGVAA----NNRLREMLRIMTE---DRGIKFFVPPLCRDNGAMIAYTGLRMY----------------------- | |||||||||||||
2 | 3b8aX | 0.13 | 0.11 | 3.77 | 1.02 | SP3 | ESGNYLAIDLGGTNLRVVLVKLS-GNHTFDTTQSKYKLPHDMRTTK---------------HQEELWSFIADSLKDFMVEQELLNTDTLPLGFTFSYPASQNKINEGI------------LQRWTKGFDIPNVEGHDVVPLLQNEISKREL----PIEIV----------ALIN--DTVGTLIASYYTDP-------ETKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSPMAIEHLVLPRTKYDVAVDEQSPRPGQQAFEKMGYYLGELLRLVLLELNEKGLMLKDQDL--SKLKQPYIMDTSYPARI---EDDPFENLEDTDDIFQKDFGVKTTLPERKLIRRLCELIGTRAARLAVCGAICYKTGHIAADGSVYNKYPGKEAAAKGLRDIYGWTGDASKIVPAEDGSGAGAAVIAALSEKRIAEGKSLGIIGA------------ | |||||||||||||
3 | 2ch5A | 0.16 | 0.12 | 3.88 | 1.07 | PROSPECTOR2 | PAAIYGGVEGGGTRSEVLLVSEDGK-----ILAEADGLSTNHW----------------LIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLS---LSGGDQEDAGRILIEELRDR--------------------------------------------FPYLSESYLITTDAAGSIATA------------TPDGGVVLISGTGSNCRLINPDGSESGCGGGDEGSAYWIAHQAVK----------IVFDSIDNLEAAPHDIGYVKQAMFHYF----------------------QVPDRLGILTHL--------YRDFDKCRFAGFCRKIAEQQGDPLSRYIFRKAGEMLGRHIVAVLPEIDQGKIGLPILCVGSVWKSWELKEGFLLALTQGRAQNFF-SSFTLMRHSSALGGASLG-----ARHIGHLLPMDYSANAIAFYSYTFS | |||||||||||||
4 | 2ch5A | 0.17 | 0.12 | 3.94 | 0.75 | SPARKS-K | MAAIYGGVEGGGTRSEVLLVSE---DGKI-----LAEADGLSTNHWLIG-------------TDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLS---GGDQEDAGRILIEELRDRF----------------PYLSESY----------------------------LITTDAAGSIATAT------------PDGGVVLISGTGSNCRLINPDGSESGCGGGDEGSAYWIAHQAVKIVFDSIDNL-------EAAPHD-------IGYVKQAMFHYFQV-----------------PDRLGILTH---------LYRDFDKCRFARKIAEGAQQ-GDPLSRYIFRKAGEMLGRHIVAVLPEPVLFQGKLPILCVGSVWSWELLKEGFLLALTQGRAQNFFS-SFTLMKHSSALGGASLGARHIGHLLPMDYSANAIAFYSYTFS----- | |||||||||||||
5 | 2ch5A | 0.13 | 0.09 | 3.12 | 0.91 | FFAS-3D | PQIYGG-VEGGGTRSEVLLVSEDGK-----ILAEADGLSTN----------------HWLIGTDKCVERINEMVNRAKRKAGVDPLVPLRSLGLS---LSGGDQEDAGRILIEELRDR--------------------------------------------FPYLSESYLITTDAAGSIATA------------TPDGGVVLISGTGSNCRLINPDGSESGCGGSAYWIAHQAVKIVFDSIDNLEAAPHDI------------------GYVKQAMFHYFQV-----------------PDRLGILTH---------LYRDFDKCRFAGFCRKIAEQQGDPLSRYIFRKALGRHIVAVLPEIDPVLFQGKIGLILCVG--SVWKSWKEGFLLALTQGRAQNFFSSTLMKLRHSSALGGASLG--ARHIGHLLPM------------------ | |||||||||||||
6 | 1huxA | 0.15 | 0.09 | 2.88 | 0.40 | HHpred | -SIYTLGIDVGSTASKCIILKDG---KEI--VAKSLV-------AVGTG------------TSGPARS-----ISEVLENAHMKKE-DMAFTLATG-----Y--------------------G---R--------NSLE-------------G--------I------ADKQMSELSCHAMGASFIW---------PNVHTVIDIGGQDKVIHVENGTMTNFQMNDKCAGTGRFLDVMANILEV-KV-----------------------SDLAELGAKST-------KRVA--------I-----------------SSTCTVFA-ESEVISQLSKGTD---KIDIIAGIHRSVASRVIGLANRVG---IVKDVVMTGGVAQ---NY-GVRGALEEGLGV-----EIKTSQYNGALGAALYAYKKA-------------------------- | |||||||||||||
7 | 3b8aX | 0.13 | 0.11 | 3.89 | 0.64 | MUSTER | ESGNYLAIDLGGTNLRVVLVKLSGN-HTFDTTQSKYKLPHDMRTTKH---------------QEELWSFIADSLKDFMVEQELLNTDTLPLGFTFSYPASQNKI--NEGILQ----------RWTKGFDIPNVEGHDVVPLLQNEISKREL----------------PIEIVA--LINDTVGTLIASY--YTDPE---TKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSPMAIFDNELPRTKYDVAVDEQSPRPGQQAFEKMGYYLGELLRLVLLELNEKGLMLKDQD-----LSKLKQPYIMDTSYPARIEDDPFENLEDTDDIFQKDFGVKTTLPERKLIRRLCELIGTRAARLAVCG-ICYKTGHIAADGSVYNKYPGKEAAAKGLRDIYGWTGDASKIVPAEDGSGAGAAVIAALSEKRIAEGKSLGIIGA------------ | |||||||||||||
8 | 3f9mA | 0.10 | 0.08 | 2.92 | 1.00 | CNFpred | EVGDFLSLDLGGTNFRVMLVKVGE-QWSVKTKHQMYSIPEDAMTG----------------TAEMLFDYISECISDFLDKHQMKH-KKLPLGFTFSFPVRHEDI---DKGILLNWTKGF-----KASGAEGNNVVGLLRDAIKRRGDF-------------------EMDVVAMVNDTVATMISCYYED-------HQCEVGMIVGTGCNACYMEEM-GRMCVNTEWGAFGGELDEFLLEYDRLVDES-QQLYEKL-------IGGKYMGELVRLVLLRLVDENFHGEASEQLRT--RGAFETRFVSQ-----VESDT----GDRKQIYNILSTL-CDIVRRACESVSTRAAHMCSAGLAGVINRMRES-MRITVGVDGSVYKLHSFKERFHASVRRLT---SCEITFIESEEGSGRGAALVSAVAC-------------------------- | |||||||||||||
9 | 3wqtA1 | 0.16 | 0.06 | 1.98 | 0.43 | HHsearch-2 | --HYYVSIDIGSSSVKTIVGEKFH--NGINVIGTG-------QTYTSG--I----KNGLIDDFDIARQAIKDTIKKASIASGVDIK-EVFLKLPIIGTEVYFINGSHIEKVLEG-IRE-Q-----ET-----EVINVFP---------IRFIVDKENE-VSDPKELIARGVILINMIKCVEACGVDYNYGLFSSAISTISSSIAFDELLD--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 3b8aX | 0.12 | 0.10 | 3.60 | 0.93 | Neff-PPAS | -SGNYLAIDLGGTNLRVVLVKLSGN-HTFDTTQSKYKLPHDMRTTKH---------------QEELWSFIADSLKDFMVEQELLNTDTLPLGFTFSYPASQ-----------NKINEGILQRWTKGFDI-PNVEGHDVVPLLQNEISKREL----------------PIEIVALINDTVGTLIASYYTDP-------ETKMGVIFGTGVNGAFYDVVSDIEKLEGKLADDIPSNSPMAINDNEHLVLPRTKYDVAVDEQSPRPGQQAFEKMTSGYYLGELLRLVLLELNEKGLMLKDQDLSKLKQPYIMDTSYPARIEDDPFENLEDTDDIFQKDFGVKTTLPERKLIRRLCELIGTRAARLAVCGKRGYKTGHIAADGSVYNKYPGKEAAAKGLRDIYGWTGDASTIVPAEDGSGAGAAVIAALSEKRIAEGKSLGIIGA------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |