Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | CHRMPERSFFIKGHQFPVCARCTGFYTGLMIYLIVNLFYKHPYDWNMLFISMVLMVPVAIDGFTQYFGPRESTNTLRFITGFIGGIGLII |
1 | 5gupV | 0.11 | 0.11 | 4.00 | 1.19 | SPARKS-K | | KTLLHKYSDIPEGTECHRKAYASTSIGGATGLIVSAYSIALRTGRYTFTSAAIGAIFGLTSCISAQVREKPDDPLNYFIGGCAGGLTLGA |
2 | 1nekD | 0.13 | 0.12 | 4.26 | 1.13 | MUSTER | | ---SNASALGRNGVHD-ILVRATAIVLTLYIIYMVGFFATSGASAFTKVFTLLALFSILIHAWIGMWQVYVKPLALRLMLQLVIVVALVV |
3 | 5jkiA | 0.09 | 0.09 | 3.37 | 1.14 | SPARKS-K | | VRPDFAPLVHESSFSFP-SGHSMNAACVYPVIAYFLVKHLPFLSKHKKMVYIIAGVIAVLVGISRVYLGVHF--VTDVLGGFSLGLLLFF |
4 | 5da0A | 0.19 | 0.14 | 4.67 | 0.51 | FFAS-3D | | ---------------------QVGLYASFIIALITAFLGGRPGMATGAMALLMFAATVLTGVLQVVFGWAKLARYLKVMVGFVNALAILI |
5 | 6h7dA | 0.08 | 0.07 | 2.66 | 0.26 | HHpred | | ---------KFDNQMLQL--FTSSLYLAALVASFMASVITRKHGRKV--SMFIGGLAFLIGALFNAFANVSMLIIGRLLLGVGVGFANQS |
6 | 4h33A | 0.10 | 0.08 | 2.90 | 1.08 | MUSTER | | -------------RSNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTV-----YGDIVPVTPIGRILASIMMLFGIAF |
7 | 5ezmA | 0.11 | 0.08 | 2.83 | 0.80 | CNFpred | | ---------------------RAAAFTGLALLAAPMWSVAAH--FNTLDMTLAGVMSCVLAFMLMGQHP-AARRGWMVACWAAMGVAILT |
8 | 4g1uA | 0.11 | 0.11 | 4.00 | 0.42 | HHsearch-2 | | LFRNPLADPGLLGISSALYSHMVGAFIGSLAITIIFTLSRWGHGNLARLLLAGIAINALCGAAVGVLTYISDDQQLRQFSLWSMGCILGL |
9 | 4od4A2 | 0.09 | 0.08 | 2.93 | 0.95 | Neff-PPAS | | ---------------PKGALAASLAMHAAAVALFIAGVEAYGLGAIATVSTALTALVIILVQAMAWLGRVKESFNLNLAVPIIIGAGIIV |
10 | 4ybqA1 | 0.12 | 0.11 | 3.93 | 0.44 | HHsearch | | -EKTYNIESFTLTLLWS--LTVSMFPFGGFIGSLMVGFLVNNLGRKG--ALLFNNIFSILPAILMGCKSFEIIIASRLLVGICAGISSN- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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