Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | KQTWRNLLFAHWPVPADELRAYVPKELPLDTFEGSAWLAVVPFRMTDIRLRGLPPIPGTSRFPELNVRTYVTLHDKPGVYFFSLDAAHTLAVKLARWLYHLPYYRADMGVTVQNETVFYRSERRQAGPAFAARYRPVSAPYTAEPGSLEHWLTERYCLYTLNGRRDVMRCDIHHRPWPLQKAEAELYENTMLTGNGLPFAPDVPPLLHYAEAL |
1 | 3bh2A | 0.13 | 0.12 | 4.23 | 1.94 | SPARKS-K | | KFHNREYFNIVYRTDMDALRKVVPEPLEID--EPLVRFEIMAMHDTS----------GLGCYTESGQAIPVSFNGVKGDYLHMMYLDNEPAIAVGRELSAYPKKLGYPKLFVDSDTLVGTLDYGKL-RVATATMGYKHK--ALDANEAKDQICRPNYMLKIIPDGSCELINAKITDVTVHEAWTGPTRLQLHAMAPLDLPVKEIVSSSHILAD |
2 | 3bh3D | 0.14 | 0.12 | 4.15 | 1.23 | FFAS-3D | | PYRFVNYMIITYRTDPAAIEAVLPEPLQM----AEPVVRYEFIRMPDS--------TGFGDYSESGQVIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGP---VRIATGTMGYKYEALDRSALLASLAEPNFLLKIIPDGSPRICELVR--YHTTDVAIKGAWS-------------APGSLELHPHA |
3 | 3bh2A | 0.15 | 0.14 | 4.58 | 1.10 | HHpred | | --HNREYFNIVYRTDMDALRKVVPEPLEID--EPLVRFEIMAMHDTS----------GLGCYTESGQAIPVSFNGVKGDYLHMMYLDNEPAIAVGRELSAYPKKLGYPKLFVDSDTLVGTLDYGK-LRVATATMGYKHKA--LDANEAKDQICRPNYMLKINYDGSPRICELINAKITVTVHEAWTTRLQLFDPLDLP--VKEIVSSSHILA- |
4 | 3bh3D | 0.16 | 0.14 | 4.53 | 1.26 | MUSTER | | RFVNREYMIITYRTDPAAIEAVLPEPLQMA--EP-----VVRYEF--IR---MPDSTGFGDYSESGQVIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGP---VRIATGTMGYKYEALDRSALLASLAEPNFLIIPHVDGSPRICELVR--YHTTDVAIKGAWS--------------PGSLELHPHA |
5 | 3c8wA | 0.12 | 0.11 | 3.84 | 2.17 | CNFpred | | RFINREFFIIAYETDPDLLQAILPPDMELLE----PVVKFEFIRMPDST--------GFGDYTESGQVVPVRYKGEEGGFTISMFLDCHAPIAGGREIWGFPMKLAKPKLFVEEDTLIGILKYG-SIDIAIATMGYK--HRPLDAEKVLESVKKPVFLLKNIPPLVNQLTKTYLTDITVKGAWTGPGSLELHPHALAPIS-KKIVSVSHFITD |
6 | 3bh3D | 0.14 | 0.13 | 4.33 | 2.15 | HHsearch-2 | | RFVNREYMIITYRTDPAAIEAVLPEPLQMA--EPVVRYEFIRMPDST----------GFGDYSESGQVIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGP-VRIATGTMGYKYEA--LDRSALLASLAEPNFLLKPHVDGSPRICELVRYAWS-APGSLELHPH-ALAPVALP--VLEVLSARHFVCD |
7 | 3bh3D | 0.13 | 0.11 | 3.90 | 1.94 | Neff-PPAS | | RFVNREYMIITYRTDPAAIEAVLPEPLQMA--EPVVRYEFIRMPDST----------GFGDYSESGQVIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGP---VRIATGTMGYKYEALDRSALLASLAEPNFLLKIIPDGSPRICELVRYHTTDVAIKGAWSA---------------PGSLELHPHA |
8 | 3bh3D | 0.14 | 0.13 | 4.32 | 2.87 | HHsearch | | RFVNREYMIITYRTDPAAIEAVLPEPLQMA--EPVVRYE--FIRMPDS--------TGFGDYSESGQVIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGP-VRIATGTMGYKYEA--LDRSALLASLAEPNFLLKPHVDGSPRICELVRYHWS-APGSLELHPHAPVAALPV----LEVLSARHFVC- |
9 | 3bgtA | 0.15 | 0.12 | 4.14 | 1.11 | PROSPECTOR2 | | KQQYRREYIITYRTDPAAIEAVLPEPLQA---EPVVRYEFI-----------RPDSTGFGDYSESGQVIPVTFRGERGSYTLA-FLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGP----VRIATGTGYKYEALDRSALLASLAEPNFLLIPHVDGSPRICELVR--YHTTDVAIKGAW-------------SAPGSLELHPHA |
10 | 3bh3D | 0.12 | 0.07 | 2.47 | 0.90 | SAM | | -----EYMIITYRTDPAAIEAVLPEPLQMA--EPVVRYEFIRMPD----------STGFGDYSESGQVIPVTFRGERGSYTLAMFLDDQPPLAGGRELWGFPKKAGKPRLEVHQDTLVGSLDFGPV-RIATGTMGYKYE-------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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