Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | LRFLGRLLHDANLWHLNRHSVARAMAVGLFAAFMPIPLQMLLAAALAILVRGNMPIAVSLVWLTNPITMPPVFYCTYKVGSWLLGQPPRQLPDSYSWDWVMSQMSTLWQPFLLGSVVTGVVLGALAYFLTMLYWRWWVSRQWR |
1 | 4huqS | 0.13 | 0.12 | 4.12 | 1.17 | SPARKS-K | | -------------DTLSMVTMGVLMALQLVISRIKVSFTFLIVALIAKWFWWGMLTAAVVDVIGTLMTFIGFTVSAVLGSLIYAVFLYRQPVSWWRVIGASVLIATLLNTLWVTLLPVRALKTPVQIVLVYLLLKSQVIQMIQ |
2 | 4ui9O1 | 0.10 | 0.08 | 3.08 | 0.89 | FFAS-3D | | --------------WVTPYKIAVLVLLSEMSRVSLVERRRLNQQLLPLLQGPDITVSKLLKLIEESC-PQLANSVQIRIKLMAEG----------ELKDMEQFFDDLSDSFVVGLFLRHMILAYSLYTALQQYFQSDENKK-- |
3 | 3zuxA | 0.19 | 0.16 | 5.18 | 0.27 | HHpred | | -SDFDILFK-------HPKVVIIGIAVGVIVGCCPGGTAS---NVMTYLARGNVALSVAVTSVSTPLLTPAIFLM--LAG-----EML-EIQAGMSKEKALPLVSVAAIVLIIGAVVGESLHNGIGYLLGFFAAKWTGL---- |
4 | 6mjpG1 | 0.10 | 0.09 | 3.38 | 0.90 | MUSTER | | FKILDWYIGR-------TIVATTALVLVTFVGLS-GIIKYVEQLRKVGEGSYDLLQALLFVVLSIPRDVEMFFPMAALLGALIG---LGALASSSELVVMQAAKLDIGLSVLKTAIPLMIIVTLLGEWGAPQAQKMARDMRAF |
5 | 5gpjA | 0.05 | 0.05 | 2.30 | 0.97 | CNFpred | | --ATYANARTTLEARGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADL-RNPAVIADNVGDNVIAGMGSDLFGSYAESSCAALVVASISSFGLNHELT |
6 | 3nd0A | 0.12 | 0.10 | 3.48 | 0.58 | HHsearch-2 | | GQMTGGWFKATQ--ENQRILIAVGAGAGLATAFAPLGVALIGEEMHPRFRTLAYHSLLFGCVMAT------------IILRMIRGQSAIISTEFKRVP-----LDS-----LWMFIILGILFGVMGYTFNRGLFKVLDWFDRP |
7 | 4rfsS | 0.12 | 0.10 | 3.72 | 0.90 | Neff-PPAS | | FWGLITFVRAFTWPSSP---VAPLIFTNPLISILPRLLMGLVAGSLYLWGRHRQWSMRQAMQVAAGCAALTNTVLVLGLVFLFYQTPAVL-------------GYVLMISLFTNGIPELILDVLVAPLIAMPLRRQWERLKPQ |
8 | 2m20A | 0.14 | 0.03 | 1.19 | 0.52 | HHsearch | | -----------------------------------------------------------------------------------------------------------KIPSIATGLVGALLLLLVVALGIGLFIRRRHIVRK- |
9 | 5widA | 0.08 | 0.06 | 2.49 | 0.79 | SP3 | | AEAIGNGIESKSFYDVKLDELKEAEAI-AVGYKMLLPMEKFMDETLVASNPQGKIGAAFGSYGWSGEAPILIAEKMREMGMTVMDPVILHKPTDKDLQECKRLGIDIAEKVKHK----------------------------- |
10 | 4hzuS | 0.15 | 0.13 | 4.50 | 0.67 | PROSPECTOR2 | | MT------------KGSLKENTITVALSILVVIGIVTLCEVGIYTSAILYGRRMGLLVGGASGFYPVWCLFSLVIHGTQGLVVGWLLPRHHKGIRSMLLPLLVGSLVMVPAGLASIFGNVVQVGFGAGVTLSIVGPLTRLKPD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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