Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | SLQEQLLKAGLVDQKKAKQLKQEKRKQAKQTPKGHQVEDETKLRAQQAREEKAQRDREMNRLRQEEADRKALKAQVKQLIEMNRINRNKGEVGYQFADEGKVKKIYVTQELQDGLASGRFAIARMGDAYEVISRKVAEKIRERAPEFVVVLNDNKNAEPDEDDPYAAYQIPDDLMW |
1 | 5t5sA | 0.04 | 0.04 | 1.97 | 0.86 | SPARKS-K | | VMEAKVKAQTAPNKDVQREIADLGEALATA-----VIPQWQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQFIDSN-----PNQPLVILEMESG------ATAKALNEALKLAMLFTVDAGKITCLCSEWVQQVSGLDVSAQATGKNVGCLQEALQLATSFAQLRLG--- |
2 | 3k5bA | 0.14 | 0.10 | 3.50 | 0.79 | FFAS-3D | | KLEAILSQEV---EAEIQALLQEAEAKAEAVREAEEKAKALLQARERALEAQYRAALRRAESAGELLVATARTQARGEVLEE------------------------VRRRVREALEALP----QKPEWPEVVRKLALEALEALPGAKALVANPEDLPHLEA--------------- |
3 | 3s6gA | 0.17 | 0.09 | 3.00 | 0.30 | HHpred | | -------------------------------------------------------------------TLTQANLALVDAIRDAGGRAARGVDKLG--RVGEPRHIH-LDLVGSAARAGQAAILACDGTLVNINADVVRALHALQPYKVVFLTGTGG-LLDEDG----DILS----- |
4 | 4dt0A | 0.13 | 0.12 | 4.11 | 0.95 | MUSTER | | KIEYILNEA----RQQAEKIKEEARRNAEAKA---EWIIRRAKTQAELEKQRIIANARLEVRRKRLAIQEEIISSVLEEVKRRLETMSEDE------YFESVKAL---KEAIKELNEKKVRVMSNEKTLGLI-ASRIEEIKSELGDVSIELGETVDTMGG-ETEDGRIRI-DEARM |
5 | 3ll9A | 0.15 | 0.07 | 2.49 | 0.61 | CNFpred | | -----------------------------------------------------------------QNWVKKLNSHVCDALLAEGIPAVSMQPAFIRAHAGRISHADIS-LIRSYLEEGMVPVVYGDVFSVISGDQLINHFSLRMPERVILGTD----------------------- |
6 | 6gmhQ | 0.13 | 0.06 | 1.98 | 0.52 | HHsearch-2 | | RYFSYLSK---LA-LAATEARQCSDLLSQAQYRARKQDEEERELRAKQEQEKLLRQKLLKEQKKLLEQRAQYVEKTKNILMFT--------------------------------------------------------------------------------------------- |
7 | 4dt0A | 0.09 | 0.09 | 3.21 | 1.03 | Neff-PPAS | | -------KIEYILNEARQQAEKIKEEARRNAEAKAEWIIRRAKTQAELEKQRIIANARLEVRRKRLAIQEEIISSVLEEVKRRLETMSEDE------YFESVKALL--KEAIKELNEKKVRVMSNEKTLGLI-ASRIEEIKSELGDVSIELGETVDTMTEDGRIRIDNTFEARMER |
8 | 4oydB | 0.24 | 0.07 | 2.12 | 0.42 | HHsearch | | QEADKLKKAGLVNSQQLDELKRRL--------------EELKEEASR-KARDYGREFQLKLE-------------------YG--------------------------------------------------------------------------------------------- |
9 | 5waqA2 | 0.11 | 0.07 | 2.67 | 0.62 | SP3 | | ------------DPKANREAYQAFAELVQRFPNS-KYAADATARMVKLVDALGGNEMSVARYYMKRGAYIAAANRAKKIIGSYQNTRYVEESLA--------------ILELAYKKLDK-----PQLA-----ADTRRVLETNFPKSPFLTHAWQP-------------------- |
10 | 3rrkA | 0.15 | 0.14 | 4.78 | 0.71 | PROSPECTOR2 | | ELLAELQKAGVLSPTEEAELKRWEAVVSQSSKPFTGSLEEAEAVLRPVASRAEVLGKERAALEEEIQTIELFGKAAEKLAALAHGLDESPRLGVIPF---LVAKPEELEAVRKALQRFVLEAEPLENQLAALKRSELEAARSS-------LSRLGLAELRFPGAYGAMPVPQKAKY |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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