Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | VIATSLHMEIDDLFPVAETLQMLRFAEVEGGDIKLTPEGRRFAETDTNERKHLFAHHLLTHVALAAHIRRVLDERPSHRAPWSRFSDELEDHMAADDAEQTLRAVISWGRYAEVFAYD |
1 | 1fokA | 0.14 | 0.14 | 4.65 | 0.75 | SPARKS-K | | QGNKKGYIDNWSSDGFLRWAHALGFIEYISDSFVITDVGLAYSKSASAIEKEILIEAIS-SYPPAIRILTLLEDGQHTSLPEGILLDTLANAMPKDSSDKYARMIGGWLDKLGLVKQG |
2 | 2x4hA | 0.10 | 0.08 | 2.81 | 0.87 | FFAS-3D | | -IAKDLKIAPSSVFEEVSHLEEKGLVKKKEDGVWITNNGTRSINY-LIKAHRVIEILLVNIGIDKQTACEYSKQ--------------FDYLIPEEIIDKLYNYL------------- |
3 | 2ewfA1 | 0.11 | 0.09 | 3.39 | 0.62 | HHpred | | --------GAFSTRDRVAPMKTYGFVFVDEGYLRITEAGKMLANNR--RPKDVFLKQLVKSINPLVFVLSLLKK--VGGLSKLDIAMFCLTATNNNQVDEIAEEIMQFRNEREKI--- |
4 | 2f5cA | 0.15 | 0.14 | 4.84 | 0.84 | MUSTER | | DIAEALAVHPSSVTKMVQKLDKDEYLIYEYRGLVLTSKGKKIGK-RLVYRHELLEQFLRIIVDKIYNDVEGIEHHLSWNS-IDRIGDLVQYFEEDDARKKDLKSIQKKTEHHNQ---- |
5 | 2fokA | 0.14 | 0.13 | 4.32 | 0.68 | CNFpred | | -----------SSDGFLRWAHALGFIEYINDSFVITDVGLAYSKSASAIEKEILIEAISS-YPPAIRILTLLEDGQ-TSLPEGILLDTLANAMWEGSSDKYARMIGGWLDKLGLVKQG |
6 | 1fokA | 0.12 | 0.12 | 4.18 | 0.51 | HHsearch-2 | | IADQKGYIDNWSSDGFLRWAHALGFIEYINDSFVITDVGLAYSKSDGAIEKEILIEAIS-SYPPAIRILTLLED--GQHLTEGILLDTLANAIWEGSSDKYARMIGGWLDKLGLVKQG |
7 | 5cwpA2 | 0.16 | 0.15 | 5.05 | 0.68 | Neff-PPAS | | EALKLIVEAIEAAVRALEAAERTGDPEVRELARELVRLAVEAAEEVQRNPSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPSGWLE-------- |
8 | 2ewfA1 | 0.11 | 0.10 | 3.70 | 0.78 | HHsearch | | AFAKPQFLGAFSTRDRVAPMKTYGFVFVDEGYLRITEAGKMLANNR--RPKDVFLKQLVWSINPLVFVLSLLKK--VGGLSKLDIAMFCLTATNNNQVDEIAEEIMQFRNEREKIKF- |
9 | 3dp7A | 0.12 | 0.11 | 3.90 | 1.06 | SP3 | | EISGRTGLTRYAAQVLLEASLTIGTILLEEDRYVLAKAGWFLLNDKMARVNMEFNHDVNY--QGLFHLEEALLNGRPSQLPVQKSWFGFDHFYSDQSFGKALEIVFSH-------HPK |
10 | 3e7qA2 | 0.06 | 0.06 | 2.60 | 0.58 | PROSPECTOR2 | | AYLAVTGRVMRLLRGAIDFEASFSAELLDPQLLDAWLAFWGAVGSIEAIGRVHDHSYGEYRALLVGVLRQLAEEGGWADFDAELAAISLSATFTPRQGVQICEAWVDGLEAGAHRRFR |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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