Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | DGERSPLLPAEPGDAGTPGGGGTPQWGPAGAKPAPPQGFPPFPEGHPAVLPGEDPPPYSPLTSPDSGSAPMINCRVCQSLINVEGKMHQHVVKCSVCNEATPIKNAPPGKKYVRCPCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGPLSPEPQPVGVRVICGHCKNTFLWTEFTDRTLARCPHCRKVSSIGRRYPRKRCICCFLLGVIMAATATGLAFGTWKHARRYGGIYASWALVILLAVVCLGRAMYWACMKVS |
1 | 3m1cA | 0.12 | 0.10 | 3.70 | 0.93 | SPARKS-K | | LAEVTQLKGLSHNPGRSRAWVTFAAAPDREGLTFPRGDDGATER--HPDGRRNAPPPGPPAGTPRHPTTTWLAAGLLRTP-------GRYVYLSP-SASTWPV--------GVWTTGGLAFGCDAALVRARYGKGFMGLVISMR---------DSPPAEIIVVPADKTLARVGNPTDENAPAVLPGPPAGPEESTNYAQYMSRAYAEFLWRLAGLLASSGFAFVNAAHAHDAIRLSDLLGFLAHSRVLAGLAARGAAGCA |
2 | 3pmqA1 | 0.12 | 0.08 | 3.01 | 0.56 | FFAS-3D | | NQENQAVLLPQGATGAGNSSEWQHFTSETCAASCPGTFVDHKNGHYSYRFSATFNGMNGVTFLSDATQRLVIKCNSCHSNLAFHGGRYNQVETCVTCH--NSKKVSNAADIFPQ------MIHSKHLTGFPQSISNCQTC--HADNPDLADRQNWYRVPTMEACGACHTQINFPAGQGHDNSNCVACHNADWTANVHS-------------------------------------------------------------- |
3 | 6eznH | 0.14 | 0.09 | 3.03 | 0.34 | HHpred | | ----------------------------------------------------TVPTTITVE-DPNEVIQVNFAIE------S-TNKPFQNTLLIGLNLEMAEPEIKDNGSMY-------------------------KYRIDLAKLDAALEARSPEPIKATLILASSTENLFREIL-QLNLNF-DV--DH-SDSDKFGRVAKPIAVIFV-LIIFITILSLIVTWLNSCAAFNIPAVYFLGFIATIFEVIFARYYLGTSI- |
4 | 6d4hA1 | 0.11 | 0.11 | 3.91 | 0.80 | MUSTER | | MYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEHGYMDRPCNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHALQTMFQLMTPKQMYEHFKGYEYVSHINWNKVLSFTTTTFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFN |
5 | 3rkoD | 0.12 | 0.03 | 0.96 | 0.79 | CNFpred | | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FAMLYTGLVLLASLATCTFAYPWLEGYNDNKDEFYLLVLIAALGGILLANANHLASLFLG |
6 | 5vo0D | 0.14 | 0.08 | 2.62 | 0.43 | HHsearch-2 | | -------------------QGYD-----VEFDPPLE------SKYECPICLMGLRSAVQTP-------CGHRFCDSCIRKSIR-----DTGQKCPVDNEVLLEEQLFPLSLTVKCSCSEKMELRQRFATAPCPQ-CQE-SVPMSHLDEHK---SQHCLQRIMTCPDCAGSFVYAVK-QSHEQFCPFAN------------------------------------------------------------------------ |
7 | 6e5p2 | 0.08 | 0.06 | 2.30 | 1.01 | Neff-PPAS | | --ESGGGLVKAGGSLIGVSNFRISAHTRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSG-----LYSLSSVVTVPSSSLGTQTYICNHKPSNTKVDKKVEPKS----------------------------------------------------------- |
8 | 5k2mE | 0.15 | 0.03 | 1.03 | 0.53 | HHsearch | | -----------------------------------------------------------------------------------------------------------------------------------------------------------------VECPVCGSEIEIGEVELHQIVECPVCGAELEVVSL-EPLTLEEL----------------------PEVEE---DWGE--------------------- |
9 | 2jtnA | 0.15 | 0.10 | 3.25 | 0.74 | SP3 | | -----------SSQVPDVMVVGEPTLMGGEFGDEDERLITRLENTQFDAANGIDDEGGSGGHMGSGGTPEIPMCAGCDQILKALDRHHSKCLKCSDCHV--PL----AERCFSR---GESVYCKDDFFKRFGTKAACQLGIPPTQVVRRAQDFVYHLHCFA--CVVCKRQLATGDLMEDSRLVCKAD---------YETAKQ---------------------------------------------------------- |
10 | 4k0mC | 0.05 | 0.03 | 1.67 | 0.98 | PROSPECTOR2 | | KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA---------------------------------------------------------AAAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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