>PF09777 (244 residues) CRRLLTAFAEGSATLSGCLARRARPVRLCQACGGLYRSLLTQYGDIARAVGNSSESHNCA KSILTSDRLQVVVTLSSFFNDTWEAANCANCIKNNSEGLSNSTQEFMDLFNKSLACFEHN LQGQAMDLSPNNYTEVCKNCNGTYKKLNDLYNKLQRLNRHGDESGHSAHLCIDVEDAMNI TRKLWSRTFNCSVPCSDTVPVIAVSSFILFLPVVFYLSSFLHSKQKKRILILPKRIQSNA SLVN |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | CRRLLTAFAEGSATLSGCLARRARPVRLCQACGGLYRSLLTQYGDIARAVGNSSESHNCAKSILTSDRLQVVVTLSSFFNDTWEAANCANCIKNNSEGLSNSTQEFMDLFNKSLACFEHNLQGQAMDLSPNNYTEVCKNCNGTYKKLNDLYNKLQRLNRHGDESGHSAHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSSFILFLPVVFYLSSFLHSKQKKRILILPKRIQSNASLVN | |||||||||||||||||||
1 | 3l39A | 0.09 | 0.07 | 2.78 | 0.81 | SPARKS-K | FFPLLKQLSDVLSASSVLLVESMERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFDREDIHDLSCMDDVIDGINSSAKRIVIYNP--------RPISESGKELSRLIHEEAINIGKAMDEETFRKNPKPLRDYCTQLHDIENQADDVYELFITKLFEEEKDCIELIKIKEIMHELEKTTDAAEHVGKILKNLIVKYS-------------------------------------------- | |||||||||||||
2 | 1cunA | 0.11 | 0.08 | 2.98 | 0.89 | FFAS-3D | ---MVHQFFRDMDDEESWIKEYGRDLTGVQNLRKKHKRLEAELAAHEPAIQS---VLDTGKKLSDDNTKEEIQQRLAQFVDHWKE--LKQLAAARGQRLEESLEQFVANVEEEEAWINEKMTLVASEDYGDTLAAIFTVHKDRVNDVCANGEDLIKKNNHHVEN---------ITAKMKGLKGKVSDLEKAAAQRKAKLDENS----------------------------------------- | |||||||||||||
3 | 1vt4I | 0.15 | 0.12 | 4.14 | 0.47 | HHpred | -GKTWVALDVCLSYKVQCKMDFKINLKNCNSPETVLEMLQKLLYQIDP---------NWTS---RSDHSSNIKLRIHSIAKAWNAFNLSCKILLTSMTLTPEVKSLLLKYLDCPQDLPREVLT-------TNPRRLSRDGLATWDKLTTIIESSLNVL------E---------PAEYRKMFDRLSV-FPPSA----HIPTILLSLIW-FDV-IKSDVMVVVNKLHKYSLVEKQPKESTISIP- | |||||||||||||
4 | 5cwmA | 0.09 | 0.08 | 3.11 | 0.87 | MUSTER | ELKRVEKLVKEAEELLRQAKEKGSEEDL-EKALRTAEEAAREAKKVLEQAEKEGD----PEVALRA--VELVVRVAELLLRIAKESG--------SEEALERALRVAEEAARLAKRVLELAEKQG-------DPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQ----DPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARLQERVKELR | |||||||||||||
5 | 4gmxC | 0.08 | 0.06 | 2.46 | 0.77 | CNFpred | QPQQVHTFYKACGIIISEER---SVAERNRLLSDLMQLPNMAWDTIVEQSTANP---LLDSETVK-IIANIIKTNVAVCTSMGAD--FYPQLG-------HIYYNMLQLYRAVSSMISAQVAAEGLIAT---KTPKVRGLRTIKKEILKLVETYISKARNLDD-----VVKVLVEPLLNAVLEDYMNN---VPDARDAEVLNCMTTVVEKVGGVILILQSVF---------------------- | |||||||||||||
6 | 1vt4I | 0.15 | 0.13 | 4.26 | 0.99 | HHsearch-2 | SGKTWVALDVCLSYKVQCKMDFKINLKNCNSPETVLEMLQKLLYQIDP---------NWTS---RSDHSSNIKLRIHSLAKAWNAFNLSCKILLTSMTLTPDVKSLLLKYLDCPQDLPREVL-------TTNPRRLSRDGLATWDKLTTIIESSLNVL------E---------PAEYRKMFDRLSV-FPPSA----HIPTILLSLIW-F-DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS | |||||||||||||
7 | 5cwmA | 0.07 | 0.06 | 2.43 | 0.93 | Neff-PPAS | ELKRVEKLVKEAEELLRQAKEKG-SEEDLEKALRTAEEAAREAKKVLEQAEKEG-------------DPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGD--------PEVALRAVELVVRVAELLLRIAKESG-------SEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSEEAKERAERVREEARELQER | |||||||||||||
8 | 2axtm | 0.17 | 0.02 | 0.81 | 0.36 | HHsearch | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEVNQLGLIATALFV-LVPSVFLIILYVQTESQQKSS-------------- | |||||||||||||
9 | 5cwiA | 0.06 | 0.06 | 2.45 | 0.74 | SP3 | CKKAESEAREARSKAEELRQRHPDS-QAARDAQKLASQAEEAVKLACELAQEHPNADIAKLCIKA---ASEAAEAASKAAELAQRH--------PDSQAARDAIKLASQAAEAVKLACELAQEHP-------NADIAKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAEAVKLACELA---QEHPNADIAKKCIKAASEAAEEASKAAEEAQRHPDSQKA--RDEIKEASQKAE | |||||||||||||
10 | 5cwiA | 0.06 | 0.05 | 2.34 | 0.91 | PROSPECTOR2 | CKKAESEAREARSKAEELRQRHPDS-QAARDAQKLASQAEEAVKLACELAQEHPNADIAKLCI---KAASEAAEAASKAAELAQRH--------PDSQAARDAIKLASQAAEAVKLACELAQE-------HPNADIAKLCIKAASEAAEAASKAAELAQ----RHPDSQAARDAIKLASQAAEAVKLACELAQEHPNADIAKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKACER | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |