>PF09755 (302 residues) SESDSSSIDGGPIMMPPSPITREQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRGL RQASVIIQAKAEQEEEFISNTLLKKIQALKKEKETLAHHYEQEEECLTNDLSRKLTQLRQ EKCKLEQTLEQEQECLVNKLMRKIEKLEAETLAKQSNLEQLRREKVELENTLEQEQEALV NRLWKRMDKLETEKRTLQIKLDQPVSDPASPRDLSNGDTASNLSAHIQHLRGEVSRLRAQ LAHAQQEHTEKMEKFAKEEKHVKEENLRLQRKLQLEVERREALCRHLSESESSLEMEEER HY |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SESDSSSIDGGPIMMPPSPITREQLQKRIESLQQQNRVLKVELDTYKLRVKALQEENRGLRQASVIIQAKAEQEEEFISNTLLKKIQALKKEKETLAHHYEQEEECLTNDLSRKLTQLRQEKCKLEQTLEQEQECLVNKLMRKIEKLEAETLAKQSNLEQLRREKVELENTLEQEQEALVNRLWKRMDKLETEKRTLQIKLDQPVSDPASPRDLSNGDTASNLSAHIQHLRGEVSRLRAQLAHAQQEHTEKMEKFAKEEKHVKEENLRLQRKLQLEVERREALCRHLSESESSLEMEEERHY | |||||||||||||||||||
1 | 4tqlA | 0.15 | 0.11 | 3.59 | 1.32 | SPARKS-K | -------------------------------------------------YKQMVQELEKARDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQIKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKLLEKIKKNID---------------DLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKEIAEKVLKG------------------- | |||||||||||||
2 | 2tmaA | 0.12 | 0.11 | 3.76 | 2.40 | FFAS-3D | --------------MQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKL-ELAEKKATDAEADVASLNRRIQLVEEEL-DRAQERLATALQKLEEAEKAADESER-GMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKL-VIIESDLERAEERAELSEGKCAELEEEIKTVTNN-----LKSLEAQAEKYSQKEDKYEEEIKVLSKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMT------- | |||||||||||||
3 | 5nnvA | 0.14 | 0.11 | 3.71 | 1.25 | MUSTER | -----------------AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSES--SSTSGEEKLEEAAKH-------KLN-----DKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLYKQKTTLL----------------------------------------- | |||||||||||||
4 | 2tmaA | 0.15 | 0.13 | 4.24 | 1.09 | CNFpred | --------------------DKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVA-SLNRRIQLVEEELDRAQERLATALQKLEE-AEKAADESERGMKVIESRAQKDEE-KMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAEL-SEGKCAELEEEIKTVTNNLKSLEAQ------------AEKYSQKEDKYEEEIKVLSDKLKEAETRAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI------------ | |||||||||||||
5 | 2tmaA | 0.15 | 0.13 | 4.34 | 0.86 | HHsearch-2 | ---------------------MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDEL-DKYSEALKDAQEKLELAEKKAT-DAEADVASLNRRIQLVEEELDRAEKAADESEEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEE-RAELSEGKCAELEEEIKTVTNNLKSLEA------------QAEKYSQKEDKYEEEIKVLSDKLKEAET----RAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI----- | |||||||||||||
6 | 6f1tX | 0.08 | 0.07 | 2.88 | 1.74 | Neff-PPAS | ---------------------IRQKEKDLVLAARLGKALLERNQDMSRQYEQMHKELTDKLEHLEQEKHELRRRFENREGEWEGRVSELETDVKQLQDELERQQLHLREADREKTRAVQELSE--QNQRLLDQLSRASEVERQLSMQVHALKEDFREKNSSTNQHIIRLESLQAEIKMLSDRKRELEHRLSATLEENDLLQGTVEE--LQDRVLILERQGHDKDLQLHQSQLELQEVRLSYRQLQGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | |||||||||||||
7 | 2tmaA | 0.16 | 0.15 | 4.83 | 1.29 | HHsearch | -------MDAIKKKMQMLKLDKENALDRAEQAEADKKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATASLNRRIQLVEEELDRAQERLA-TALQKLEEAEKAADESERGMKVIESRAQKD-EEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEE-RAELSEGKCAELEEEIKTVTNNLKSLEA------------QAEKYSQKEDKYEEEIKVLSDKLKEAE----TRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTSI----- | |||||||||||||
8 | 1c1gA | 0.12 | 0.11 | 3.74 | 1.60 | PROSPECTOR2 | M---------------------DAIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQKKLKATEDEL-DKYSEALKDAQEKLELAEKKATDAEADV-ASLNRRIQLFEEELDRAQERLATALQ-KLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIA-EDADRKYEEVARKLVIIESDLERAEER------------AELSEGKCAELEEEIKTVTNNLKSLEAKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYI | |||||||||||||
9 | 2tmaA | 0.14 | 0.12 | 4.06 | 0.18 | SAM | ----------------------DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDASLNRRIQLVEEELDRAQERLA-TALQKLEEAEKAADESERGMKVIESRAQKD-EEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLER--------AEERAELSEGKCAELEEEIKTVTNNLKSLEA-----QAEKYSQKEDKYEEEIKVLSDKLKEAE----TRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMT------- | |||||||||||||
10 | 4uosA | 0.12 | 0.08 | 2.68 | 1.16 | SPARKS-K | ------------------------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGED-SEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEN-------------------GEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELGVG---------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |