Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | KMDLNKADLLRLLSYLEGELQARDIVIATMKAEKAKQLLYQAKYGRFGLGDPFSALQRDSDNLKDNSFDETAIKSMYDNQLAQLENLIATQRKAQLKMREQLSAAEKRYHKVCNELEDEKRKHAQDTAQGDDVTYMLEKERERLKQEIEYEKSQNKKLEKDLKKTLASLEEERANSIKHKQVAVMLIKEQKK |
1 | 2tmaA | 0.12 | 0.11 | 4.07 | 1.42 | FFAS-3D | | ----DVASLNRRIQLVEEELDRAQERLATALQKEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDH |
2 | 5nnvA | 0.12 | 0.12 | 4.22 | 1.10 | MUSTER | | AESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ-LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESS-STSGEEKLEEAAKHKLNDKTKTIELIAL |
3 | 5nnvA | 0.12 | 0.11 | 4.08 | 1.29 | Neff-PPAS | | -AKEEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQ-LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESS-STSGEEKLEEAAKHKLNDKTKTIELIAL |
4 | 4e40A1 | 0.13 | 0.10 | 3.64 | 0.97 | SPARKS-K | | ---------------------VSIASGILLRPAVIRNATTEFSRKKSELAKGGAAVERASAAVDRSGLDKTN------ETAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDATFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEKAAEEAETESSKV------ |
5 | 1fewA | 0.14 | 0.12 | 4.26 | 1.41 | FFAS-3D | | --SLSSEALMRRAVSLVTDSTSTFLSQTTYALIEAITEYTKAVY-------TLTSLYRQYTSLLGKMNSEEE---------DEVWQVIIGARAEMTSKHQEYLKLETTWMTAVGLSEMAAE--AAYQTGADQASITARNHIQLVKLQVEEVHQLSRKAETKLAEAQIEEKTQEEGEERAESEQEAYLRE--- |
6 | 4l3iA | 0.14 | 0.12 | 4.27 | 0.27 | HHpred | | ASVPSLEEFRQHVTTLRETKASRREEFVSIKRQ-IIL--C-EELD-HTPDTSF---ERDVVCEDEDAF------CLSLENIATLQKLLRQLE-QKSQNEAVCEGLRTQIRELWDRLEEEREAVATISGSKAKVRKALQLEVDRLEELKQ-NKKVIEAIRVELESLLQLHDAE---IVRLKNYLFEGVQKWE- |
7 | 5xeiA | 0.15 | 0.15 | 5.06 | 1.03 | MUSTER | | EYDAKKEKALEELKQAEENLARVDLLIKEVKKQLDKLEKERNDALRYLLKERLERARVALLLGEIKRL--ESMIDEGERKRAEIEE--NTIKVKSAQLRIQLEEKRRELKHFDAALIRSVKEVSLDLEVLRKEIEDMEAEIKALEPVNMKAIEDFEVVERRYLELKSKREKLEAEKESIIEFINEIEKEKKN |
8 | 4tqlA | 0.15 | 0.14 | 4.74 | 0.76 | CNFpred | | ------ELMRKIFQEVKQEVEKAIEEMKKLYDEAIEQMIQQIKQGGDKMEELLKRAKEEMKKVKDKEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKK-DELLEKIKKNIDDLKKIAEDLIKKAEENIK---EAKKIAEQLVKRAKQLIEKAKQVAEELIKKILQLIEKAKE |
9 | 6gmhQ | 0.24 | 0.23 | 7.13 | 0.55 | HHsearch-2 | | QINQDHPDAWSLIGNLHLAKPGQKKFERILKQEKEKRHQDRAIYKRNDAKNLYAANGIGAVLAHKATADISDAVQMYENCLRYLANVLVLQRLA-----TSVLKDEKSNLNAVKELELAHRYFSYLARQCSDLLSQAQYHVARLRAKQEQEKLLRQKLLKEQKEEQKKLLEQRAYVEKTKNILMFT------ |
10 | 5nenA1 | 0.08 | 0.07 | 2.94 | 1.29 | Neff-PPAS | | ----AQAQVDSLRDQYYTTLATEGRLLAERDGLSIVTFSPILDAVK-DKPRVAEIIALQTQLFASRRQALQSEIDGYKQSMDGIRFQLKGLQDSRGNKQIQLSSLREQMNSMKQLAADG-YLPRNRYLEVQRQFAEVNSSIDETVGRIGQLQKQLLESQQRIDQRFADYQREVRTQLAQTQMDASEFRNKLQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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