Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KTWGMLCHLSALSGFLIPFGNILGPLICWLVKKDTDSFIDKGGKESLNFQISMMIYGIISGILTLILIGFLMLAAIAVLEIVYVIIASIKANEGQNYHYPLTIRFI |
1 | 6a2jA3 | 0.10 | 0.09 | 3.47 | 1.36 | SPARKS-K | | KKMQFHMIGILIYSYIVVLLFVWIIVAAVHAITKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYES-------- |
2 | 6a2jA3 | 0.12 | 0.11 | 3.98 | 1.23 | MUSTER | | QFHMIGILIYSYIVVLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYES-------- |
3 | 6a2jA3 | 0.12 | 0.11 | 3.98 | 1.02 | Neff-PPAS | | QFHMIGILIYSYIVVLLLFVWIIVAAVHAITSYKDQKQIFWGWISCLIFITLQALSGIMIVYSELALGFALAHSFFIACLFGVLCYFLLLIARFRYES-------- |
4 | 4o6yA1 | 0.08 | 0.07 | 2.65 | 1.04 | SPARKS-K | | ---------PIFMVVRVLGFIIAALVLTWTVHYRGGHIFNVHPVMMVIGLILFNGEAMLAYKSVQGNLKKLVHLTLQLTAFILSLIGVWAALKFHIDKGIE----- |
5 | 4xydA1 | 0.15 | 0.12 | 4.15 | 0.81 | FFAS-3D | | -NIVRMLHTNSLIVLLLGFMGAAYFVIPEESERE------IHSPLLAYLQLAIMVLGTLGVVVTYLFQPVWVKMGIVVAALIFMYNISMTVLQGRK---------- |
6 | 6d79A | 0.12 | 0.08 | 3.01 | 0.26 | HHpred | | RKLGLPRAIALLILSF-IPLNLVAAPLWLIFGNEL-AWLREKRWQSLSFGGIVYLVLLIPVV------NI--LPA--------AVAGATLFWVR------------ |
7 | 5ezmA3 | 0.13 | 0.12 | 4.23 | 1.07 | MUSTER | | SPRSWGKQLIGMAIVAAC-GLLASPVVATLNANHIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHE--------TVGRPA |
8 | 4he8F | 0.11 | 0.10 | 3.77 | 0.88 | CNFpred | | --VTAGVYLIARSSFLYSVLPDVSYAIAVVGL-ALSAFGQTDIKKIVAYSTISQLGYMFLAAGVGAYWVALFHVFTHAFFKALLFLASGSVIHAGEQDVRKMGGLW |
9 | 5tj5A | 0.18 | 0.16 | 5.24 | 0.57 | HHsearch-2 | | AKVQVFLLLMAL---VCIPLLLVKPLHFK---F--DIMI-HQVIHTIEFCLNCVALSLLSSVLWMTIVGVFLFAMWFLTCAVLVTSAMLHSLMSKPY-EPFAFEYK |
10 | 5kbwA | 0.10 | 0.09 | 3.54 | 0.87 | Neff-PPAS | | -EIPALIVSFLLGPGVGMFVVLVKDILFFLMKSGDPVGIAMNAVLGMSFVGIAGLIYHRNKSRATAIKGMIVATLFATAFALGLNALIVPLYFEAPFELYLKFFPF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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