>PF09657 (489 residues) FDTAISASDWKYSAAITGLIYYFKELEKKYEIKKITIDEITDSYLLYNKEDINEENYLDF IEKFYSKYSEDTLAHKKLENQLKHTKEFTSEIIKSIKENMSANTVLKKVFSKTKFDGTNK DEVLKLLDENRHSIIKETFRNKKDLYDNYCQTSRLLEKGDNSPCRLKGYYFDPNRKSKAT GYNFVSSSVDYFDDEIFDFIPFAFTGSSFETIFLNDNLDLEILENMNYKLREYFSEEKEN ETERLKSLKQEKAIKEKKNEETEGNQNSVPLKKLFLNILQKKVDYIKYGMEIIYKNRDKE YFETWYLRNESIKVLKEIEDFSKLDIRIKITDKYYFNLLDEVFSAVLNLSLLTNSILYLL KDRESFIKIDTTRENLSKLFKYNYAINELIKVNQIIRNGGKEMDENLKKSIKACSIAVVK KFIKENSLNKLASYRQKLLSSVVAKNHKRILDVLTQLSVYSGVYFSFAFDYIENQTQNED IIHYFILEL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 480 | | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FDTAISASDWKYSAAITGLIYYFKELEKKYEIKKITIDEITDSYLLYNKEDINEENYLDFIEKFYSKYSEDTLAHKKLENQLKHTKEFTSEIIKSIKENMSANTVLKKVFSKTKFDGTNKDEVLKLLDENRHSIIKETFRNKKDLYDNYCQTSRLLEKGDNSPCRLKGYYFDPNRKSKATGYNFVSSSVDYFDDEIFDFIPFAFTGSSFETIFLNDNLDLEILENMNYKLREYFSEEKENETERLKSLKQEKAIKEKKNEETEGNQNSVPLKKLFLNILQKKVDYIKYGMEIIYKNRDKEYFETWYLRNESIKVLKEIEDFSKLDIRIKITDKYYFNLLDEVFSAVLNLSLLTNSILYLLKDRESFIKIDTTRENLSKLFKYNYAINELIKVNQIIRNGGKEMDENLKKSIKACSIAVVKKFIKENSLNKLASYRQKLLSSVVAKNHKRILDVLTQLSVYSGVYFSFAFDYIENQTQNEDIIHYFILEL | |||||||||||||||||||
1 | 4y21A | 0.13 | 0.11 | 3.70 | 1.14 | FFAS-3D | -----------------------------------------------------KERFVKLLDQLHN------SLRIDLSMYRNNFPASSPERLQDLKSTVDLLTSITFFRQELQSPPRASQVVKDCVKACLNSTYEYIFNNCHELYGREYQTDPAKKGEVPP--------EEQGPSIKNL------DFWSKLITLIVSIIEEDYTPCLNQF---PQELNVGKIQDMKYAMEEHDKHRLCKSADYMNLHFKVKWLYNEYVAELPTFKDRVPVIQWLDENEEVSRDFLHGALERDKKQQTSEHALFSCSVVDVFSQLNQSFEI------IKKLECPDPQIVGHYMRRFAK--TISNVLLQYADIVSKDFASYCSKEKEKVPCILMNNTQQLRVQLEKMFEGGKELDAEASGTLKELQVKLNNVLDESSVAQDADNVLQPIMDLLDSNLLKRVLKELWKLVMNAKSLTPKQCAVV--ELALDTIKQYFHAGL | |||||||||||||
2 | 6d03E | 0.12 | 0.11 | 3.77 | 1.02 | MUSTER | --------------------------STNTTDNIDYFDISDESYLISQLRPHSNIYFFDEFKRYASYHTEIKRYEDIHKTKVNS---LLNEASRAIGICNRAKNTVKGLINILKTQRESYDVKLRQYEEKKEAFRGCLLNKNRKNLDQIKKINNEIKLKCSQDC--TNVYFDMIKIYLVDFKKMPYENYDTFIKQYKNSYLSGVDMIRK----IEKQIDNPVTINAIKFTQKEMGYIIDRFEYHLQKVKHIDQVTALSDGVKPKQVTKNRLKEYYFNIGNYYSIFKFGKDSLNMLNK-----ALIHKEKIVHNLLGELFGHLEERISKLIDSEYFITESNNIISQSEETKLAEDVYDKNTKLIEDLTLYPHLEINEFKKDY-DNNVEDLRESIIYIQS-----YVSSIKSAYRYNVLEKDSVESKQKNQKKVDELLSIIDSISY-SNFSVAENFQKMKDYYK-EIEKLKIKILQLIEAIKKYQQHVEEL | |||||||||||||
3 | 3w3uA | 0.10 | 0.08 | 3.00 | 1.09 | CNFpred | ---------RVQYGCCKVLGQISTAF----------------------SPFIQRTAHDRILPALISKLT-SRVQTHAAAALVAFSEFASKDILEPYLDSLL--TNLLVLLQSN------KLYVQEQALTTIAFIAEAAKNKFIKYYDTLMPLL---------LNVLK---------------------NSVLKGKCMECATLIGFAVG-KEKFH---EHSQELISILVALQNSDIDEDDALRSYLEQSWICRILGDDF--------LLPIVIPPLLITAKATQDVGL-DWDVVQVQ--GKHIAIHT-KVSAMELLQSYA--TLLRGQFAV---YVKEVMEEIALPSLDFDGVRAAGATLIPILLSCLLVLLWHKASSKLI-MPEITQVYHNSLVNGIKVMGCLSEDQLAAFTKGVSANLTDTYERM-DEDLLDEINKSIAAVLKTTNGHYLKNLENI-------WPMINTFLLDNPILVIFALVVIGDL | |||||||||||||
4 | 6d03E | 0.09 | 0.08 | 3.19 | 1.64 | Neff-PPAS | ----------------------------------DISDESNYYLISQLRPHFSNIYFFDEFKRYASYHTEIKRYEDIHKTKVNSLLNEASRAIGICNRAKNTVKGLINILEKFKTQRESYDVKLRQYEEKKEAFRGCLLNKNRKNLDQIKKINNEIRDLLEKLKCSQDCQTNVYFDMIKIYLVDFKKMPYENYDTFIKQYKNSYLSGVDMIRKIEKQIDNPVTINAIKFTQKEMGYIIDRFEYHLQKVKHSIDQVTALSDGVKPKQVTKNRLKEYYFNIGNYYSIFKFGKDSLNMLNKALIHKEKIVHNLLGELFGHLEERISKLIDSEYFITESNNIISQSEETLKLAEDVYDKNTKLIEDLTLYPH-LEINEFKKDYDNNVEDLRESIIYIQSYVSSIKSAYRYNVLEKDSVESKQKNIPANSNAQKKVDELLSIIDSISYS--NFSVAENFQKMKDYYK-EIEKLKIKILQLIEAIKKYQQHVEEL | |||||||||||||
5 | 5mqfM | 0.05 | 0.04 | 2.18 | 1.18 | PROSPECTOR2 | FS----VKCWLWYRYLKARRAQVKHRCVTDPAYEDRAFVFMHKMPRLLPITQHSRIWPLYLRRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDEHELCDLISQNPDKVQSLNVDAIIRGGLTREEAIRTVMTVRDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLEFEQLISRRPLL------LNSVLLRQNPH-----HVHEWHKRVALHQNTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDKVNFKQVDDLASVWCQCGELELRHTALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLLDLRIATPQIVINERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDAKTLYLLYAQLEEVYERATRAVEPAQQYDMFNIYIKRAAGIYQKAIEVLSDEHAREMCLRFADMCKLGEIDRARAIYSFCSQICDRTTGAFWQTWKDFEVRRSVQATYNTQV | |||||||||||||
6 | 5lj3H | 0.09 | 0.07 | 2.62 | 1.14 | FFAS-3D | --------------------------------------------IKFQREN--WEMIRSHVSPIISNLTMDNLQESHRDLFQVNILIGRDIICKNVVDFTLNNGRLIPALSAIALLNSDIPDIGETLAKELMLMFVQQFNRKDYVSCGNIL---------QCLSIL---------------FLYDVIH----EIVILQILLLLLE-----------KNSLRLVIAVMKICGWKLALVSKKTHDMIWEKLRYIL----------QTQELSSTLRESLETLFEIRQKDYK-----------SCENFNELTMAFDTLRQKLVEFKKKIYLVLKSSLSGDEAAHKLLKLKIANNLKKSVVDIIIKSSLQEST------------FSKFYSILSERMITF--------HRSWQTAYNETFEQNYTQDIEDYETDQLRILG-KFWGHLISYEGRIFIKFLFQELVNE-LGLDELQLRLNSSKLDEHIRYSFTAGL | |||||||||||||
7 | 3w3vA | 0.11 | 0.08 | 3.06 | 1.08 | CNFpred | ---------RVQYGCCNVLGQISTKF----------------------SPFIQRTAHDRILPALISKLT-SRVQTHAAAALVNFSEFASKDILEPYLDSLL--TNLLVLLQS------NKLYVQEQALTTIAFIAEAAKNKFIKYYDTLMPLL---------LNVLK---------------------NSVLKGKCMECATLIGFAVGKEKFHEHSQELISILVALQNS-DDALRSYLEQSWSRICRILGDDFVPL-----------LPIVIPPLLITAKATQDVGL-DWDVVQVQ--GKHIAIHT-KVSAMELLQSYA--TLLRGQFAV---YVKEVMEEIALPSLDFDGVRAAGATLIPILLSCLLVLLWHKASSKLI-MPEITQVYHNSLVNGIKVMGCLSEDQLAAFTKGVSANLTDTYERM-DEDLLDEINKSIAAVLKTTNGHYLKNLENI-------WPMINTFLLDNPILVIFALVVIGDL | |||||||||||||
8 | 5mqfM | 0.07 | 0.07 | 2.74 | 1.51 | Neff-PPAS | LPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEYIEYLKSSDRLDEAAQRLATVVNDERFVLWHELCDLISQNPDKVQSLNVDAIIRGGLTRFGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTV--RDFTQVFDSYAQFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEWHKRVALHQGRREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDEKATKVNFKQVDDLASVWCQCGELELRH---------ENYDEALRLLRKATALPARRAEYFDGSEPVQNRVYKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYERGISLFK--WPNVSDIWSTYLTKFIARYGGRKPKYAKTLYLLYAQLEEEWGLARHAMAVYERATRAVEPAFNIYIKRAAEIYGVTHTRGIYQKAI | |||||||||||||
9 | 5xn7A | 0.08 | 0.07 | 2.78 | 1.13 | PROSPECTOR2 | EGFEVRSTILLDNPQQKSIERFILANFDNFEQVDNKVLSHHDGRTRILARKAN-----------------VELSVTELLDAAHVSGKVRGESYQQVID------ALTEYHASTAEHADYELTSVEKLLNLRKQVEGYVLVQANALLNQVNSRLEAVSVLVVS----------------------EQSIKAHDSFSHLYDQLDNANLKESKHLYLDGNGDFVTKGKGNLANIDAVLEKVKAAVSHEYGQVVADTIFAGLSANDLAKDGKGIDIAGLNKVHQAIEQHSPVSATYIWKPSDHSALGHAALGQAAADFNKQFNDLKLRWSDFSQPAHQGLNDGETKLKRFVEKLNASEGYASVLLGNPDLASTGIPAHVFQSYDDVANRFAEELQKQAQASGDPALVEKRIDNVVRLFAERALEEIASQADEGRVPDARYQLLT----KNASSTVAKVLKAKLIGHTWRPKFTELFNFGQALQEAQLEIAAKK | |||||||||||||
10 | 5c6gA | 0.07 | 0.07 | 2.65 | 1.13 | FFAS-3D | ------LQQYLVRQCVHGLRYVKDGFQLTVEED--------------------IQVTLQLARVLLEETHEVELAEQYLGSLRTRLRTTPLTDARHAVEFQLLYDVPLA---------KEDRAELRQVVRHTTGLLEELADSDARYCRIIGLEAGGARSNSAVLQEYLKLLQLVSAGPVGL-------------HAFVLCSCVAFILDRVVELDIQLDENIMDLLTDFKDFFSTHKDADGDYHDCKNILLLFQSVSYLTTCYSKSSNFSTKFLPKVLKTSQELKETLQKRTSLVHVQSIRNIYDK---VVDLCRFYQTWESLILSERVEGGIPRLQYSEYNILLEAISSQQAQQADLSHVGRLYSTLTKSKDPELRLIG----IAHLYTLIVAELSSCSEGPEGISELTQKTTDAWEQLQHAYLSSSVQNNVWKCSVAILWAISRDQQTLYMQQLNEFFTDNAKKSLLLHFLLQKRCDISSSCFRYVAGI | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |