Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | DIIRGACGGFLFGIPLLYTMEVWWIGSQTKPQMMMLAIASTFIVVFLLNQTEGFRKRRHSSKISQTATDTIEAIAIGLVCSAFMLFLLQELTPETSLKESLGKIIFESVPFTLGVALTNQFLGDTRNSNQAEDDNKKPSQINATFADIGATLIGATVIAFNIAPTDEISMLAAAASPPWLLAIIATSLLISYGIVFEAGFSDQQKRRRQRGIFQRPLSETTMSYLVSLLAGTFILWFFHKLSLSDPWTMWLDHTLVLGLPATIGGAAGRLAI |
1 | 5y78A | 0.08 | 0.07 | 2.79 | 1.16 | SPARKS-K | | TLKVGFYFFLWYFFNFIFNIANKRTLNMWKWVLSTIQLGVGALYCTFLWVLGLRTKPNVSKKLIKALIWPSLGHTLGHAATCMSFSLVA----------ISFTHVVKSAEPVFGAVGSALVLGEFFHPLLTFTW-----------TGFITAMISNVAFVTRNITSKFTMVDFKNEKTLIAQNTYALITIISFFMELPFEGFPPLVSAIAGVSKAKLFGSIMFCSLFYHLYNEVSYLCLDNV----SPVSFSIGNTIKRVIIIFGSILVFRTP |
2 | 5z1fA | 0.11 | 0.10 | 3.60 | 1.09 | FFAS-3D | | -IRQYFIYFFVAVTILFYMIPIAFVSAITRFLPQIALIVFLAMLPKLLLFLSKAEGIPSQSHAIRAASGKY--FYFSVFNVFIGVTLAGTLFNTDMIINLLATSLPKSATFFLTYVALKFFIGCKTEAEVKEAWYPGDLSYATRVPGDMLILTITFCYSV-IAPL--------------ILIFGITYFGLGWLVLNQALKVYVPSYESYGRMWPHIHQRILAALFLFQ---VVMFGYLGAKTFFYTALVIPLIITSLIFGYVCRQKFYGGF- |
3 | 3rkoB | 0.15 | 0.12 | 4.10 | 1.28 | CNFpred | | -------YSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFY-------DPKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMV-MLMWATLMLLGGAVGKSAQLPLQTWLADA-----------AGPTPVSALIHAATMVTAGVYLIARTHGLFLMTPEVLHLVGIVGAVTLLLAGFAALV----------------TDIKRVLAYSTMSQIGYMFLALGVQ-----AWDAAIFHLMTHAFFKALLFLASGSVI |
4 | 6i1rA | 0.10 | 0.09 | 3.42 | 1.03 | Neff-PPAS | | -YLVAALLTILTSSQGILTTLSQSNYDYA-TIPFLAELFKLSVSGFFLWKECRTSPSVRMTKEWRSVRLYVVPSVIYLIHNNVQFATLTYVD-------PSTYQIMGNLKIVTTGILFRLVLKRKLSQVKGCGDSPCDSLFSAPLEGYLLGILSACLSALAGVYTEYLMKKNNDSLYWQNVQLYTFGVIFNMGWLIYGDFKAFELGPWWQRLFNGYSITTWMVVFNLGSTGLLVSWLMKYSD-------NIVKVYSTSMAMLLTMVLSIYLF |
5 | 4mt1A2 | 0.11 | 0.11 | 4.08 | 1.10 | SPARKS-K | | NIRYTLIPTIVVPISLLGGFAFISYMGMSINVLTMFAMILVIGIVVDDAIVVVIMAGEGLPPTKKAMGQISGAVIGITAVLISVFVPLAMFGAAGNIYKQFALTMASSIAFSAFLALTPALCATGFFGWFNKKFDSWTHGYEGMMVVYIGLAVVGVFLFMRLLPTLILYGLAVAASWSIPLAVIPLGLIGAAAGVTGRNLFEGLLSVPSFANDIYFQVGFVTVMGLSAKNAILIIEFAKLQAQGKSAVEAALEAARLRFRPIIMTSFAFILG |
6 | 6c08C | 0.10 | 0.10 | 3.51 | 1.06 | FFAS-3D | | -IWNTMMGTSILSIPWGIKQAGFTLG-------IIIIVLMGLLTLYCCYRVLVCKYYFGGFGKWSSLVFSLVSLIGAMVVYWVLMSNFLILLSASFFARFTFLGTISVIYLIFLVTYKAIQLGFHLEFHSMFFVPEFRTL--------FPQLSGVLTLAFFIHNC--IITLMKNNKDLSLAYLLVGLTYLYVGVLIFAAFPSPPLSKECIEPNDILVFVARTFLLFQMTTVYPLLGLMGQLHVFVLNVFVVGAGVLMARFRYSGALCGLAL- |
7 | 3qnqA1 | 0.10 | 0.07 | 2.46 | 0.25 | HHpred | | ---------------------------------------------------------VAEQRHLLAIRDGLVL-TMPFLIIGSIFLIISTLPIPKNWNGYPVSATFNIMAFGIAYRLGEYY----K-VD---------------ALASGALSLVTFLLATPFQVAYIDGVIAALMGSQGLFVAMIIAIISTEIYRFLVQKKMIIKMPETVPPAVTRSFAALIPGFIVVTVVWIIRLIFEHTT-FGSIHNVVGKLLQ--EPLILG-------- |
8 | 6i1rA | 0.11 | 0.10 | 3.70 | 0.93 | MUSTER | | WYLVAALLTILTSSQGILTTLS-----NYDYTIPFLAELFKLSVSGFFLWKECRTSPSVRMTKWRSVRLYVVPSVIYLIHNNVQFATLTYVD-------PSTYQIMGNLKIVTTGILFRLVLKRKLS-VKGCGDSPCDSLFSAPLEGYLLGILSACLSALAGV-YTEYLMKKNNDSYWQNVQLYTFGVIFNMGWLIYGDFKGFELGPWWQRLFNGYSITTWMVVFNLGSTGLLVSWLMKYSD-------NIVKVYSTSMAMLLTMVLSIYLF |
9 | 3rkoC | 0.09 | 0.08 | 3.08 | 1.24 | CNFpred | | LAIDGLSLLMVVLTGLLGVLAVLCSWKEIYQGFFHLNLMWILGGVIGVFLAI-------------DMFLFFFFWEMMLVPMYFLIALWGHKASGKTRITAATKFFIYTQASGLVMLIAILALVFVHVWTFNYEELLNTPMSSGVEYLLMLGFFIAFAVKMPVVPLGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFS------------PLFPNASAEFAPIAMWLGVIGIFYGAWMAFA--TDIKRLIAYTSVSHMGFVLIAIYTGSQL |
10 | 5mg3D | 0.15 | 0.10 | 3.36 | 0.53 | HHsearch-2 | | QLSLLLRAG---ALIAPIQIVEERIGPNIEQGLEACLAGLLVSILFMIIFYKKFG--LI----------ATSALIANLILIVGIMSLLP--GATLSMPGIAGIVLTLAVAVDANVLINEEELSNGRTVQ-QAIDEGYRGAFSSIFDANITTLIKVIILYA--VGTGAIKGFAITTGIGVA-TSMFTAIVGTRAIVNLLYGGKRVKK------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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