Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | TIKYKNQKGMEFIIDVRLKEDNSILVQIQLFSTGSPALATRKFMIPYGHDGIIPPFDFNALEEGIHNMLALMYKESNIGEFKQEDMVECIDMLMMEEAPVIDINVMDAYDVYTHSSV |
1 | 5dilA | 0.13 | 0.11 | 3.85 | 0.96 | SPARKS-K | | DEVNTQKEG-KFRLTIKIRNVLSLRVLVNGTFLKHPSLSTLHRLNAYDQNGLVAKLDLTDGHRILNSLFERFDEGHS-KPIRAETAVGVLSQFGQEHRLSPE--------------- |
2 | 2xzm42 | 0.17 | 0.15 | 5.03 | 0.57 | FFAS-3D | | ----KWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV-----RAIRRKINTFITNEAAKLGIAEFSKNDYTKKIEKETKNIFPLQNITIRKVKVLK----- |
3 | 2p1nA | 0.12 | 0.08 | 2.71 | 0.23 | HHpred | | ------------KIVLKSSDGESFEVEEA-VALESQTIAHM-V------NGVPLP-NV--TSKILAKVIEYCKRHD-ADKIDQATLILAANYLNIKNL------------------- |
4 | 5cn1A | 0.10 | 0.09 | 3.18 | 0.69 | MUSTER | | RHILNQSDHLRIDYELTRESMTKLRLVIFYSNISSDPITNFALLVPKGTTLSLQPQSGNMLRDGIKQIASV--EGISVNLGKP---------IKL-NYCTKGDSKEESGTTSLP--- |
5 | 6dhxA | 0.07 | 0.05 | 2.08 | 0.61 | CNFpred | | DFSFLNNNNILIYFEKEIGPNVRVRIWNKYTRQ--DRTLTKSVKIALEKSDKYIE-----DETQVRAYLKKY-------GITAKDLDAHYEKIVN---------------------- |
6 | 6h9hB | 0.09 | 0.07 | 2.57 | 0.40 | HHsearch-2 | | GIRIVQRCGVQHTLSIKGLDDPKRYFVRNLVMKRGL-------------------TKTAENTTQVASRILS-------------ALERQAVAYSLDLPPQVDIHVESQFVGLADVEF |
7 | 6c0bA3 | 0.12 | 0.10 | 3.61 | 0.78 | Neff-PPAS | | DVKVITKDNVNILTGYYLKDDIKISLSLTLQDEKTIKLNSVHLD-----------------ESGVAEILKFMNRKGS--TNTSDSLMSFLESMNIKSIFVNFLQSNIKFILDANFII |
8 | 4yzpA3 | 0.11 | 0.07 | 2.50 | 0.51 | HHsearch | | ---------------------------------DDPKLEKSEFTISAISGDLKIPASLNGTKL---ATVKGVVDTGRPVNYDEDYE-KD-GDLYLKERVLKY--LKSDSTFTFELV- |
9 | 3nt2A | 0.10 | 0.09 | 3.47 | 0.66 | SP3 | | IVVIETKGGIVINAEIYVNCKYGYDIQCEIVGEDSISLRKEGRFSTDILMDWQRRFV-AAYDVEIQDFIDSIQKKGEVSGPTAWDGYIAAVTTDAESGQKEKVELKEKYQ------- |
10 | 4mboA2 | 0.12 | 0.12 | 4.23 | 0.47 | PROSPECTOR2 | | NSSVTEHTNVKTNVRSRIDERQTETYITQINPEGKEMYFASGLGNLYTIIGSDSPVNLLNAEVKILKTNSKNLTDSMDQNYDSPEFEDVTSQYSYTNDGVSDINQTYGSKYSYGHTN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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