Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | AMDPINGGMQLFNQATSSLNMNNNIADAAGDSKSSKAMEDAMARSDASSARMIDLQSRHAEKMKVENTLQAMQSAEDDAANKKISSTAQNAKGISY |
1 | 5svaO | 0.05 | 0.05 | 2.38 | 0.94 | SPARKS-K | | RLKSLNDIETQLCSMLQEASQVTFIFGELK-RGNESVKPQFENHVKQFYERLDKSTTQLRKEIQLLDENVGQDTEKMEEQLDLLSAILDPSKSK-- |
2 | 1t1mC2 | 0.09 | 0.08 | 3.21 | 0.88 | FFAS-3D | | -VNPIKEAKEKMKRTLEKIEDELRKMRPTTE-QREKWVKKAKEIVEEGKIAIRNIRREILKKKRLENEIQKLTDEFIEKLDEVFEIKKEEIMEF-- |
3 | 5a8jA3 | 0.07 | 0.03 | 1.27 | 0.22 | HHpred | | -----------------------------------------------------TVINEVSYYMLLRYYGNLISEGKSEEATRVVQELLTAAERT-- |
4 | 3zbhA | 0.11 | 0.10 | 3.75 | 1.03 | MUSTER | | -LT-PEELRGVARQYNVESSNVTELIARL---DQMSHTLQGIWEGASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSATILEDTDQQIASQIR- |
5 | 5jeqA | 0.04 | 0.04 | 2.12 | 0.43 | CNFpred | | AINIAGSLKMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHLNANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVL |
6 | 3qfwA1 | 0.23 | 0.07 | 2.29 | 0.50 | HHsearch-2 | | AATAPAEPGQLLNMLFGNSSIQPDIALADVE----------------------------------------------------------------- |
7 | 3hgfA | 0.04 | 0.04 | 2.12 | 0.91 | Neff-PPAS | | MVKEIEKKIENITKIDKKKYIYDNMKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKSENMIKSMEKYIKDLDEIKEQSPKAEMNT |
8 | 5a8jA3 | 0.07 | 0.03 | 1.30 | 0.38 | HHsearch | | ---------------------------------------------------DRTVINEVSYYMLLRYYGNLISEGKSEEATRVVQELLTAAERTK- |
9 | 3zbhA | 0.13 | 0.11 | 4.00 | 0.75 | SP3 | | -LT-PEELRGVARQYNVESSNVTELI------ARLDQMSHTLQGIASSEAFIQQYQELRPSFEKMAVLLNEVGQQLHNSATILEDTDQQIASQIR- |
10 | 2pmsC | 0.06 | 0.06 | 2.69 | 0.64 | PROSPECTOR2 | | GSHEEVAPQAKIAELENQVHRLEQELKEIDEAPKLDAKKAKLSKLEELSDKIDELDAEIAKLEDQLKFKEGLEKTIAAKKAELEKTEADLKKAVNE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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