>PF09566 (278 residues) REEAEKILKKAYAVASYNPESTCTHEELIDYVIDNTHLTYKYVLFTALLSKATDEKINPL CLQKKSTLPGAYDARTICHKVIVPFEMEVLKKAMGGSNEPFLNKPARFPELSKTNAVRRG NDQNILNALCDNLPTIKTSQDAFDCLVYLLCKLIKLRDAQKKSLNFYVRETSNTPALLWT YIIKALKESFEGEILTLMVAGTYHLIYKDRPGARVEVHPVNQSGASGREVSDLDIYVDNE LISSNELKDKNFSEPDVRHAADKVITAGGNHMLFIFGP |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | REEAEKILKKAYAVASYNPESTCTHEELIDYVIDNTHLTYKYVLFTALLSKATDEKINPLCLQKKSTLPGAYDARTICHKVIVPFEMEVLKKAMGGSNEPFLNKPARFPELSKTNAVRRGNDQNILNALCDNLPTIKTSQDAFDCLVYLLCKLIKLRDAQKKSLNFYVRETSNTPALLWTYIIKALKESFEGEILTLMVAGTYHLIYKDRPGARVEVHPVNQSGASGREVSDLDIYVDNELISSNELKDKNFSEPDVRHAADKVITAGGNHMLFIFGP | |||||||||||||||||||
1 | 5cwjA | 0.09 | 0.05 | 1.92 | 0.68 | SPARKS-K | SEEEQERIRRILKEARKSGT-EESLRQAIEDVAQLQDSEVLEEAIRVILRIAKESG-----------------------------------------------------------------SEEALRQAIRAVAEIAKEAQDSEVLEEAIRVILRIAKESG---------SEEALRQAIRAVAEIAKEAQDPRVLEEAIRVIRQIAEESGS---------------------------------------EEARRQAERAEEEIRRRAQ--------- | |||||||||||||
2 | 1aisB | 0.12 | 0.08 | 2.66 | 0.82 | FFAS-3D | -AFALSELDRITAQL----KLPRHVEEEAARLYRGRSIESVMAACVYAACRLLKVPRT-----------------------LDEIADIA-----------------------------RVDKKEIGRSYRFIARNLNLTPKPTDYVNKFADEL---------------GLSEKVRRRAIEILDEAYKRGLTGKSPAGLVAAALYIASL-----------LEGEKRTQREVAEV----------------ARVTEVTVRNRYKELVEKKIK------VP | |||||||||||||
3 | 1vt4I | 0.14 | 0.12 | 4.21 | 0.36 | HHpred | YKDILSVFEDAFVDNFDDSILSK---EEIDHIIMKDAVSGTLRLFWTLLSKQ-----EEMVQKFVE---E--VLRINYKFLMSPIKTEQ-RQ-PS-----MMT-RMYQDRLYNDNQVFAKYNVQPYLKLRQALLELRPAGKTWVALDVCLSYKVQCKMDFKIFWLNL--KNCNSPETVLEMLQKLLYQTDHSSNIKLRIHSIQARLLKSKPYENCLLVLLNVQNAKAWNAFKILLTTATTTHISLDHHSMTLTPDEVKSLLLKYLDCPQDREVL---- | |||||||||||||
4 | 3u44A | 0.14 | 0.12 | 4.17 | 0.64 | MUSTER | QTEGELIGDEVLDELFEDAKGEKAFFELVDRYTTDRHDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDVSEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRALELTDNFLDDLAQELIQHQDDFSELYKRVPAVS-DPALLDEATDLRNGAKKLLEKLKTDYF------TRSPEQHLKSLAEMKPV---IETLVQLVISYGKRFEAAKQEKSII--------------SDL-------EHYCLAI--TAENDREPSEAARFYQEQ---HEVLVTNL | |||||||||||||
5 | 3w3tA | 0.09 | 0.06 | 2.17 | 0.69 | CNFpred | YDHARQALDRVALKLGGE-YLAAPLFQYLQQMITSWRERFAAMMALSSAAEGCADVL-LDMVIPLINDP-HPRVQYGCCNVLGQISTDFSPFI----------------------------QRTAHDRILPALISKLTSECTSRVQTHAAAALVNFSEFASKDILE------PYLDSLLTNLLVLLQSN--KLYVQEQALTTIAFIAEAA-------------------------------------------------------------------- | |||||||||||||
6 | 4xqkA1 | 0.11 | 0.04 | 1.42 | 0.65 | HHsearch-2 | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQTFDDLINQINT-------GTLFEKLTLAYLKNEPYKALYQNVWLLSEV--PESYGIPVDLVAEQKNGDLVAIQAKTNKVGKSEINSFVAELGKSYYQRGLIVSTM | |||||||||||||
7 | 3tnfB | 0.09 | 0.08 | 3.15 | 0.77 | Neff-PPAS | -NEKMEAFSKDSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVS------------------SLKDAHLAINKDQEVVEHEGQFYLLQKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTD----PKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSGKDQQLFNLGGKFYPIHKE-QKILEKDGKFYLLKQGEDWESSPEKQKKAEHDFHKLQYETPMTVKKL | |||||||||||||
8 | 4xqkA1 | 0.11 | 0.04 | 1.42 | 0.82 | HHsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------KQTFDDLINQINT-------GTLFEKLTLAYLKNEPYKALYQNVWLLSEV--PESYGIPVDLVAEQKNGDLVAIQAKTNKVGKSEINSFVAELGKSYYQRGLIVST- | |||||||||||||
9 | 1st6A | 0.08 | 0.07 | 2.72 | 0.61 | SP3 | VEKMSAEINEIIRVLQLTSWDEDAWASKDTEAMK-RALALIDSKMNQAKGWLRDPN-------APPGDAG-----EQAIRQILDEAGKAGELCAGKERREILGTCKTLGQMQGATPMAMQKAQQVSQGLDLLTAKVENAARKLEAMTNSKQAIAKKIDAAQNWLADPNGGSEGEIRGIMSEARKVAELCEEPKERDDILRSLGEISALTAKLSDLRRHGKGDSPEARALA--------KQIATS---------LQNLQSKTNRAVANTRP-----VKA | |||||||||||||
10 | 3tnfB | 0.10 | 0.10 | 3.60 | 0.87 | PROSPECTOR2 | LDEYEQAIKRAQENIKKGEELEKENLEGFEKLLTDSEELSLSEINEKMEAFSKDSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSKGQWDAIKNNPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINNLIMSTDPKENEEATKLLHKH-------NGLNLKLANLQDMLAVHRKEKSFFNEKGEEVTSLFNLGGKFYPIHKEQKILEKDLKQGKDSPEKQKKAEHDFHKLQYETPMTVISK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |