>PF09562 (241 residues) VRGRKPDTSNINQDHDGKAGHWLEHQMGIKINNKTEADLFGYEMKNQTTSGKITFGDWSA DYYIFKDYKYFTSGNTGVNRDCFMQIFGTYKLDKGRYSWSGEVTPKIKNFNRYGQKLIIT ENKDITAIYSYDQDSRQNKKDIIPVNMQINDLILARWTSNSMKKRVESKFNDKGWFKCLQ NSLGVYTNIQFGKPITFESWIDLVAEGVVFFDSGMYQGNNRPYSQWRALNNFWDSLIIET Y |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | VRGRKPDTSNINQDHDGKAGHWLEHQMGIKINNKTEADLFGYEMKNQTTSGKITFGDWSADYYIFKDYKYFTSGNTGVNRDCFMQIFGTYKLDKGRYSWSGEVTPKIKNFNRYGQKLIITENKDITAIYSYDQDSRQNKKDIIPVNMQINDLILARWTSNSMKKRVESKFNDKGWFKCLQNSLGVYTNIQFGKPITFESWIDLVAEGVVFFDSGMYQGNNRPYSQWRALNNFWDSLIIETY | |||||||||||||||||||
1 | 2oaaB | 0.14 | 0.12 | 4.10 | 2.87 | SPARKS-K | DGGWHETK----RKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHETKSLLTLFTKSPNTMLRNRYGKKDEYG---NNILHQTVSG------------NRKTNSNS--YNYDFKIDIDWESQVRLEVFDKQDIMIDNS--------------VYWSFDSLQNQLDKKLK--YIAVISAESKIKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGHGTAFRINMEKLLEYGEVKV | |||||||||||||
2 | 2oaaB | 0.13 | 0.11 | 3.89 | 2.41 | FFAS-3D | -GGWHETK----RKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHEAKSLLTLFTKSPT-------------NPRGANTMLRNRYGKKDEYGNNILHQTVSGNRKTNSNSYNYKIDIDWESQVVRLEVFDKQ-------------DIMIDNSVYWSFDSLQNQLDKKLKYIAVISAESKKYYKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGKKTAFRINMEKLLEYGEVK- | |||||||||||||
3 | 2oaaB | 0.14 | 0.11 | 3.84 | 3.96 | HHpred | DGGWHET----KRKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHAKS-LLTLFTKGANTMLRNRYGKKDE---YGNNILHQTVSGN-------------------RKNSYDFKIDIDWESQVRLVFDKQDI---------------MIDNSVYWSFDSLQNQLDKKLKY--IAVISAESKIKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGHGTAFRINMEKLLEYGEVKV | |||||||||||||
4 | 2oaaB | 0.13 | 0.12 | 4.01 | 2.10 | MUSTER | DGGWHETK----RKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHETKSLLTLFTKSP-------------TNPRGANTMLRNRYGKKD-EYGNNILHQGNRKTNSNSYNYDFKIDIDWESQVVRLEVFDKQ-------------DIMIDNSVYWSFDSLQNQLDKKLKYIAVISAESKIENKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGKKTAFRINMEKLLEYGEVKV | |||||||||||||
5 | 2oa9A | 0.16 | 0.13 | 4.26 | 2.77 | CNFpred | ------------------IGKTFEDLLEKEEDNLDAPDFHDIEIKTHETASLLTLFTKSANTMLRNRYGKKDEY---GNNILHQTVSGNR------------KTNSN--SYNYDFKIDIDWEQVVRLEVFDKQD--------------IMIDNSVYWSFDSLQNQLDKKL--KYIAVISAESYYKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYTHDHGTAFRINMEKLLEYGEVKV | |||||||||||||
6 | 2oaaB | 0.14 | 0.11 | 3.84 | 4.01 | HHsearch-2 | DGGWHET----KRKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHAKS-LLTLFTNGANTMLRNRYGKKDE---YGNNILHQTVSGN-------------------RKNSYDFKIDIDWESQVRLVFDKQDI---------------MIDNSVYWSFDSLQNQLDKKLKY--IAVISAESKIKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGHGTAFRINMEKLLEYGEVKV | |||||||||||||
7 | 2oaaB | 0.12 | 0.10 | 3.64 | 3.66 | Neff-PPAS | -----------KRKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHEAKSLLTLFTKSPTNP-------------RGANTMLRNRYGKKDEYGNHQTVSGNRKTNSNS-YNYDFKIDIDWESQVVRLEVFDKQ-------------DIMIDNSVYWSFDSLQNQLDKKLKYIAVISAESKIENKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGHGTAFRINMEKLLEYGEVKV | |||||||||||||
8 | 2oaaB | 0.14 | 0.11 | 3.84 | 5.89 | HHsearch | DGGWHET----KRKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHAKS-LLTLFTKGANTMLRNRYGKKDE---YGNNILHQTVSGN-------------------RKNSYDFKIDIDWESQVRLVFDKQDI---------------MIDNSVYWSFDSLQNQLDKKLKY--IAVISAESKIKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGHGTAFRINMEKLLEYGEVK- | |||||||||||||
9 | 2oa9A | 0.13 | 0.11 | 3.89 | 2.18 | PROSPECTOR2 | MKSMSEYDGGWHETKRTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTHAAKSLLTLFTKGANTMLRNRYGKKDE---YGNNILHQTVSG--------------NRKTNSNSYNYDFKIDIDWESQVVRLEVFDKQ-------------DIMIDNSVYWSFDSLQNQLDKKLKY--IAVISAESKIKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSGKGTAFRINMEKLLEYGEVIV | |||||||||||||
10 | 2oaaB | 0.15 | 0.11 | 3.79 | 2.10 | SAM | ---------ETKRKGNTGIGKTFEDLLEKEEDNLDAPDFHDIEIKTAAKS-LLTLFTKGANTMLRNRYGKKDE---YGNNILHQTVSGN-------------------RKNSYDFKIDIDWESQVVRVFDK------------------QDDNSVYWSFDSLQNQLDKKLKY--IAVISAESKIKYNSANLFTDLTVQSLCRGIENGDIKVDIRIGAYHSHHGTAFRINMEKLLEYG---- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |