Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ATSEDTIRGMLFNGTLEVLRTVGDGSLVQRCVEECGESRFLDFFSYPVRMHCQMVSTALPVLAEEFGNSEEALRQLGRLVANRFMRVGAGKVMLSLTPRSPRQLGYSLPMAYRMAVSFGQYEVQWTGARSGRFILKRDFMPHPFHEGVMEMSLSMWGGREVKVSGRPTGG |
1 | 2o0cA | 0.16 | 0.15 | 4.91 | 1.77 | SPARKS-K | | ------MYGLVNKAIQDMISKHHGEDTWEAIKQKAGIDFFVGMEAYSDDVTYHLVGAASEVLG---KPAEELLIAFGEYWVTYTSEEGYGELLASA-GDSLPEFMENLDNLHARVGRPPAFECQHTSSKSMELHYQSTRGLAPMVLGLLHGLGKRFQTK-VEVTQTAFRE |
2 | 2kilA | 0.12 | 0.11 | 3.94 | 2.07 | FFAS-3D | | ------MKGIIFNVLEDMVVAQCGMSVWNELLEKHADRVYVSAKSYAESELFSIVQDVAQRLN---MPIQDVVKAFGQFLFNGLASRH---TDVVDKFDDFTSLVMGIHDVIGLEVNLPHINGQLLPNNQIALRYSSPRRLCFCAEGLLFGAAQHFQQK-IQISHMHTGA |
3 | 2o0cA | 0.16 | 0.15 | 4.91 | 1.80 | HHpred | | ------MYGLVNKAIQDMISKHHGEDTWEAIKQKAGIDFFVGMEAYSDDVTYHLVGAASEVLG---KPAEELLIAFGEYWVTYTSEEGYGELL-ASAGDSLPEFMENLDNLHARVLRPPAFECQHTSSKSMELHYQSTRGLAPMVLGLLHGLGKRFQ-TKVEVTQTAFGE |
4 | 2o0cA | 0.16 | 0.15 | 5.06 | 1.64 | MUSTER | | ------MYGLVNKAIQDMISKHHGEDTWEAIKQKAGIDFFVGMEAYSDDVTYHLVGAASEVLG---KPAEELLIAFGEYWVTYTSEEGYGELLASA-GDSLPEFMENLDNLHARVGRPPAFECQHTSSKSMELHYQSTRCGAPMVLGLLHGLGKRFQ-TKVEVTQTAFGE |
5 | 3tfdA | 0.16 | 0.15 | 4.91 | 1.39 | CNFpred | | ------MYGLVNKAIQDMISKHHGEDTWEAIKQKAGIDFFVGMEAYSDDVTYHLVGAASEVLGK---PAEEWLIAFGEYWVTYTSEEGYGELLASAG-DSLPEFMENLDNLHARVLRPPAFECQHTSSKSMELHYQSTRGLAPMVLGLLHGLGKRF-QTKVEVTQTAFRE |
6 | 2o0cA | 0.16 | 0.15 | 4.91 | 2.19 | HHsearch-2 | | ------MYGLVNKAIQDMISKHHGEDTWEAIKQKAGIDFFVGMEAYSDDVTYHLVGAASEVLG---KPAEELLIAFGEYWVTYTSEEGYGELL-ASAGDSLPEFMENLDNLHARVLRPPAFECQHTSSKSMELHYQSTRGLAPMVLGLLHGLGKRFQ-TKVEVTQTAFGE |
7 | 2o0cA | 0.16 | 0.15 | 4.91 | 1.71 | Neff-PPAS | | ------MYGLVNKAIQDMISKHHGEDTWEAIKQKAGIDFFVGMEAYSDDVTYHLVGAASEVLG---KPAEELLIAFGEYWVTYTSEEGYGELLASAG-DSLPEFMENLDNLHARVGLSPAFECQHTSSKSMELHYQSTRGLAPMVLGLLHGLGKRFQTK-VEVTQTAFRE |
8 | 2o0cA | 0.16 | 0.15 | 4.90 | 3.62 | HHsearch | | ------MYGLVNKAIQDMISKHHGEDTWEAIKQKAGIDFFVGMEAYSDDVTYHLVGAASEVLG---KPAEELLIAFGEYWVTYTSEEGYGELL-ASAGDSLPEFMENLDNLHARVLRPPAFECQHTSSKSMELHYQSTRGLAPMVLGLLHGLGKRFQ-TKVEVTQTAFG- |
9 | 2o09A | 0.15 | 0.14 | 4.75 | 1.44 | PROSPECTOR2 | | ------MYGLVNKAIQDMISKHHGEDTWEAIKQKAGIDFFVGMEAYSDDVTYHLVGAASEVLG---KPAEELLIAFGEYWVTYTSEEGY-GELLASAGDSLPEFMENLDNLHARVLRPPAFECQHTSSKSMELHYQSTRCLAPMVLGLLHGLGKRFQTK-VEVTQTAFRE |
10 | 1xbnA | 0.11 | 0.09 | 3.42 | 1.51 | SAM | | ------MKGTIVGTWIKTLRDLYGNDVVDESLKSVGDRVITPLEDIDDDEVRRIFAKVSEKTG---KNVNEIWREVGRQNIKTFSE-WFPSYFA---GRRLVNFLMMMDEVHLQLATPPRLIAKPVAKDAIEMEYVSKRKMYDYFLGLIEGSSKFFKEEI-SV------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|