>PF09505 (463 residues) TEYDLRMGDGKRVYHSKNQIMDDLEAGSADAADLGEISALSGDELEKLAEIIMTKSRMVG VEPGKEVPVTHDIGTLRIDGDQGNSGVGIPSSRMIGCMMHERAFGADTMELGHIDYSFKP VKPVIAQECQAMEVCQQNMIVPLLYGAMPNMGLYYTPDGPFENPGDLMKAFKIAEAQESI EKSADHLTRDMIWIIQHMMKSSSDGVNFDTTGAAGDGDMFATLHAVEALRKEFPEMYIEL GMAGECVLGMHGGLEYDGKTLAGLWPHQQAPLVTKAGANVFGPVVNTNTSMSFSWNLARA VTFIKAAVEASDIPCHVDMGMGVGGIPMLETPPIDAVSRASKAMVEVAGVDGIOIGVGDP MGMPISHIMTSGMSGIRAAGDLVARMQFSKNMRIGEAKKYVADKLGVTPLDLSDEFAMRE IREDLGIGVITSVTGAPKGIAAKMNIEKALDIKINSCEKFRNQ |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 460 | | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | TEYDLRMGDGKRVYHSKNQIMDDLEAGSADAADLGEISALSGDELEKLAEIIMTKSRMVGVEPGKEVPVTHDIGTLRIDGDQGNSGVGIPSSRMIGCMMHERAFGADTMELGHIDYSFKPVKPVIAQECQAMEVCQQNMIVPLLYGAMPNMGLYYTPDGPFENPGDLMKAFKIAEAQESIEKSADHLTRDMIWIIQHMMKSSSDGVNFDTTGAAGDGDMFATLHAVEALRKEFPEMYIELGMAGECVLGMHGGLEYDGKTLAGLWPHQQAPLVTKAGANVFGPVVNTNTSMSFSWNLARAVTFIKAAVEASDIPCHVDMGMGVGGIPMLETPPIDAVSRASKAMVEVAGVDGIOIGVGDPMGMPISHIMTSGMSGIRAAGDLVARMQFSKNMRIGEAKKYVADKLGVTPLDLSDEFAMREIREDLGIGVITSVTGAPKGIAAKMNIEKALDIKINSCEKFRNQ | |||||||||||||||||||
1 | 6ei9A | 0.15 | 0.09 | 2.92 | 1.13 | SPARKS-K | ---------------------------------------------------------------------------------------------------------PRGMRIGQYQLRNRPMAGITD---RPFRTLCYEMGAGLTVSEM------MDEPGIRSD------------------------PKEMADAARINVESGAQIIDINMAGSALLQYPDVVKSILTEVVNAV-DVPVTLKIR----TGWAPEHRNC---------EEIAQLAEDCGIQ----ALTIHGRTRACLFNGEAYDSIRAVKQKVSIPVIAN-----GDI---------TDPLKARAVLDYTGADALMIGQGRPIFREIQHYLDTG--------------ELLPPLPLAEVKRLLCAHVRELHDFYGPAKGYRIARKHVS-WYLQEHAPNDRTFNAIEDASEQLEA----LEAYFEN | |||||||||||||
2 | 2i57C | 0.08 | 0.07 | 2.85 | 1.02 | MUSTER | ----EFRIAQDVVARENDRRASALKEDYEALGANLARRGV---DIEAVTAKVE-KFFV-------AVPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVIQQLTRATPNVSLHIPWDKA-------DPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYKYGSLSHTN----------AATRAQAVEHNLECIEIGKAIGSKALTVWIGDGSNTRAFERYLSAMAEIYKGLPD---------DWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCLVDLGTN---------IEMIVARLIQFGKLGFHFNDSKYGDDDLDAGAIEPYRLFLVFNELVDAEAHPAHMIDQ-SHNVTDPIESLINSANEIRRAYAQALLVDRAADNDALMATETLKRAYRTD-----VEPILAEARRRTGGAVDPVATYRASGYRARV-AAERPASVAGGGG----- | |||||||||||||
3 | 1mxsA1 | 0.19 | 0.05 | 1.53 | 0.11 | HHWb | -------------------------------------------------------------------------------------------------------------------------LSMADKAARIDAICEKARILPVITIA---------------------------------------REEDILPLADALAAGGIRTLEVTLRSQ--H-----GLKAIQVLREQRPELCVGAGT---------------------VLDRSMFAAVEAAGAQFV---VTPGIT----------EDILEAGV-DSEIPLLPG------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 2cw6A | 0.19 | 0.10 | 3.33 | 1.04 | SPARKS-K | -------------------------------------------------------------------------------------------------------------------------------------------------TLPKRVGLQNEKN-IVS-------------------------TPVKIKLIDMLSEAGLSVIE---TTSFVSPKWVPQMGDHTEVLKGIQKF--------------------PGINYPVLTPLKGFEAAVAAGAKEVVIFGAANINCSIEESFQRFDAILKAAQSA-NISVRGYVSC-ALGCPYEGKISPAKVAEVTKKFYSMG-CY--EISLGDTIGVGTPGIMKD---MLSAVMQEVPLAALADTYGQALANTLMALQMGVSVVDSS---V-------AGLGGCPYAQGASLGIHTGVNLQKLLEA----GNFICQA | |||||||||||||
5 | 2xm6A | 0.14 | 0.12 | 3.92 | 0.76 | FFAS-3D | --------------VNLEQLKQKAESGEAKAQFQGNETTKDLTQAMDWFRRAAEQGYTPAE---------------YVLGLRYMNGEGVPQDYAQAVIWYKKAALKGQQNLGVMYHEGNGVKVDKAESVKWFRLAAEQGRDSGQQ----SMGAYFEGDGVTRDYVMAREERNDAISAQWYRKSATSGDELGQLHLADMYYFGIGVTQFSQSAEQGNSIAQFRLKALEWYRKSAEQ----GNSDGQYYLAHLYDKGAEGVAKNREQAISWYTKSAEQGDATAQALGAIYFRLGSEEEHKKAVEWFRKAAAKGEKAAQFNLGNALLGVKKDEQQAAIWMRKAAEAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGTENRNITEKKLTALQQAELLSQQ-----YIEKYAPEAWARMQKLKAQS----------------------------------- | |||||||||||||
6 | 1mxsA1 | 0.19 | 0.05 | 1.53 | 0.11 | HHpred | -------------------------------------------------------------------------------------------------------------------------LSMADKAARIDAICEKARILPVITIA---------------------------------------REEDILPLADALAAGGIRTLEVTLRSQ--H-----GLKAIQVLREQRPELCVGAGT---------------------VLDRSMFAAVEAAGAQFV---VTPGIT----------EDILEAGV-DSEIPLLPG------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 1nthA | 0.15 | 0.13 | 4.49 | 0.97 | MUSTER | QKYGLDF-KGEFIPTDKDMMEKLFKAGFEMLLECGRIVKYTEDEIWDAINNV--QKEFVLGTGRDAVNVRKRSVGDKAKPIVQGGPTGSPISEDVFMPVHMSYALVDTIVNGVMTSVGKSPIPKSPYEVLAAKTETRLIKNACAMAGRPGMGVKGPETSL-----------------------------SAQGNISADCTGGMTCTDSHEVSQLNEIDLDAISVIAHYKGNSDIIMDEQMPIFGGYAGG------IEETTIVDVATHINAVLMSSASWHLDGPVHIRWGSTNTRETLMIAGWACATISEFTDILSGNQYYP-CAGPC---TEMCLLEASAQSITDTASGRE-ILSGVASAKGVVTDKTTGMEARMMGEVARATAG------VEISEVNVILDKLVSLYEKNYASAPAGKTFQECYDVKTVTPTEEYMQVYDGARKKLEDLGLVF--------- | |||||||||||||
8 | 1mxsA1 | 0.19 | 0.05 | 1.53 | 0.47 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------LSMADKAARIDAICEKARILPVITIA---------------------------------------REEDILPLADALAAGGIRTLEVTLRSQ--H-----GLKAIQVLREQRPELCVGAGT---------------------VLDRSMFAAVEAAGAQFV---VTPGIT----------EDILEAGV-DSEIPLLPG------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2i57C | 0.08 | 0.07 | 2.85 | 0.71 | Neff-PPAS | ----EFRIAQDVVARENDRRASALKEDYEALGANLARRGV---DIEAVTAKVE-KFFV-------AVPSWGVGTGGTRFARFPGTGEPRGIFDKLDDCAVIQQLTRATPNVSLHIPWDKA-------DPKELKARGDALGLGFDAMNSNTFSDAPGQAHSYKYGSLSHTN----------AATRAQAVEHNLECIEIGKAIGSKALTVWIGDGSNTRAFERYLSAMAEIYKGLPD---------DWKLFSEHKMYEPAFYSTVVQDWGTNYLIAQTLGPKAQCLVDLGTN---------IEMIVARLIQFGKLGFHFNDSKYGDDDLDAGAIEPYRLFLVFNELVDAEAHPAHMIDQ-SHNVTDPIESLINSANEIRRAYAQALLVDRAADNDALMATETLKRAYRTD-----VEPILAEARRRTGGAVDPVATYRASGYRARV-AAERPASVAGGGG----- | |||||||||||||
10 | 1ydnA | 0.14 | 0.08 | 2.64 | 0.78 | HHsearch | -----------------------------------------------------------------------------------------------------------------------------------------------------------------AEHVEIV-EA-ARDGL--QNEKRFVPTADKIALINRLSDCGYARIEATSVPQLADSREV------AGIRR------------------------ADGVRYSVLVPNKGYEAAAAAHADEIAVFIEANINCTIAESIERLSPVIGAAIN-DGLAIRGYVSCVV-ECPYDGPVTPQAVASVTEQLFSL-GCHEVS--LGDTIGRGTPDTVAA-LDAVLAIPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDASV----------GGLGGCPFAPGAKEGFETGLDLDRLRSAGL-FTQALRQ- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |