Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | ARSLAREVAAFCADPAIGEAGNWEVRMALDERILPDTTLYLSLSRFWLSLRFDTRGIETRQLLFDHSAMLERELAALLHAWGTPRDIELTVW |
1 | 5cukA | 0.11 | 0.11 | 3.90 | 1.83 | SPARKS-K | | PLADLARLLDAVQGQVASAAESHAARLQVRLPQLGAVEVQVLHGHGQLQIEISAS-PGSLALLQQARGELLERLQRLHP--EQPVQLTFNQQ |
2 | 5cukA | 0.16 | 0.14 | 4.72 | 0.94 | FFAS-3D | | -ARLLDAVQGRI--QVASAAESHAARLQVRLPQLGAVEVQVLHGHGQLQIEISA-SPGSLALLQQARGELLERLQRL----HPEQPVQLTF- |
3 | 5cukA | 0.14 | 0.13 | 4.46 | 1.03 | HHpred | | LARLLDAVQGRIQV--ASAAESHAARLQVRLPQLGAVEVQVLHGHGQLQIEISAS-PGSLALLQQARGELLERLQRLH--PEQPVQLTFNQ- |
4 | 2rrlA | 0.17 | 0.15 | 5.00 | 1.28 | MUSTER | | QQTFSQQVMLFTRQG------QQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAES----GQLGQSSISSE |
5 | 2rrlA | 0.17 | 0.15 | 4.99 | 0.99 | CNFpred | | QQTFSQQVMLFTRQ------GQQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAES-----QLGQSSISSE |
6 | 2rrlA | 0.17 | 0.15 | 5.01 | 1.79 | HHsearch-2 | | QQTFSQQVMLFTR------QGQQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAESGI---QLGQSSISSE |
7 | 5cukA | 0.13 | 0.12 | 4.17 | 1.77 | Neff-PPAS | | PLADLARLLDAVQGQVASAAESHAARLQVRLPQLGAVEVQVLHGHGQLQIEISAS-PGSLALLQQARGELLERLQRLH----PEQPVQLTFN |
8 | 2rrlA | 0.17 | 0.15 | 5.00 | 3.23 | HHsearch | | QQTFSQQVMLFTR------QGQQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAESGI---QLGQSSISS- |
9 | 5cukA | 0.11 | 0.11 | 3.90 | 0.73 | PROSPECTOR2 | | PLADLARLLDAVQGQVASAAESHAARLQVRLPQLGAVEVQVLHGHGQLQIEISA-SPGSLALLQQARGELLERLQRLH--PEQPVQLTFNQQ |
10 | 2rrlA | 0.16 | 0.13 | 4.32 | 0.71 | SAM | | -HEWQQTFSQQV--MLFTRQGQQSAQLRLHPEELGQVHISLKLDDNQAQLQMVSPHSHVRAALEAALPMLRTQLAE---------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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