Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | IGAAALGGCTHRSQEAEIVTGSLPVDYRARHPIVIQEAAKTTEIFVGHARGGLTTAQRTDIAGLAQAWLSEGTGAITIDTPTGTPNAQAASVTVRDIQNMLVAAGIPARGVKVQPYHPNDPRQFAPVRVRYARIIADAGPCGLWPEDLGPSVKNKSYFENRPYQNFGCAYQRNMAAMVANPADLVQPRAESPSNSARRSQAFTKYRN |
1 | 2zf8A | 0.16 | 0.08 | 2.73 | 1.39 | HHsearch | | ILSELFSDCISNL---------LKYSF---EDIA------FTILHYERQGDQLTKASKKRLSQIADYIRHNQDILVLVATYSA--SQSLSERRAESLRDYFQSLGLPEDRIQVQGYG--------RVVISLGRTQ------------------------------------------------------------------------ |
2 | 2k1sA | 0.12 | 0.08 | 2.71 | 1.04 | SP3 | | ---------YYMDVQEAKLRDKMRGT-----GVSVTRSGDNIILNMDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGSTGGHNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSVEITLSPL--------LEHHHHHH--------------------------------------------------------- |
3 | 5jirB2 | 0.12 | 0.07 | 2.58 | 0.81 | SPARKS-K | | -----PYPLVDEHFYFAYHDVKRFLTDERSPGVGVRSGINTLKITVYANSPEILASEKDRVDVIATALKKMGPTRFLIEGHTADLEAALSVARAQRMAQELSRRGIEMTRITTAGHGATKPIAPSRVEITILRD------------------------------------------------------------------------- |
4 | 3oonA | 0.14 | 0.07 | 2.31 | 0.83 | FFAS-3D | | -------------------------------AIEVEKNNKGIDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLELSEKRARAIGNYLIKKVKDKDQILFKGWGSQKAKN---RRVEITIL------------------------------------------------------------------------- |
5 | 5u1hA | 0.14 | 0.07 | 2.46 | 0.54 | HHpred | | ------------------------------NAAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVNQKLSERRANAVRDVLVNEGVEGGRVNAVGYGESRPVADRRVEAEVEAE------------------------------------------------------------------------- |
6 | 2f8aA | 0.11 | 0.09 | 3.34 | 0.69 | MUSTER | | ------------------SMQSVYAPLAGGEPVSLGSRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPL---FAFLREALPAPSDDATALMTDPKLITWSPVCRNDVA-----WNFEKFLVGPD--PLRRYSRRFQTIDIEPDIEALLS |
7 | 4g4vA | 0.16 | 0.07 | 2.26 | 0.72 | CNFpred | | -----------------------------------------RVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHT-EYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNNRRVEINYE--------------------------------------------------------------------------- |
8 | 5u1hA | 0.14 | 0.07 | 2.47 | 0.93 | HHsearch-2 | | -----------------------------SNAAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQYPSTSTTVEGHTDSVNQKLSERRANAVRDVLVNEGVEGGRVNAVGYGESRPVADRRVEAEVEAEA------------------------------------------------------------------------ |
9 | 5hamA | 0.09 | 0.09 | 3.33 | 0.66 | Neff-PPAS | | ----AITFRNTALTEEMLKDYTAKGEEKNKILAEVQETIKIANLIPDKEERALMLGDAKKREEILKLSDAEREKLKNDLLRGGEAQQQINEDILNRATKDIKDNGKEAAVIPIEMGYGKYDKKDNQIILTFNDSLGNSINLPKLIDKTLGNLPNKPIIIDEQTKQQGVFTVDNGIKIAKGQAILSTEESKGEKGLRLREHHAQILTD |
10 | 2zf8A2 | 0.15 | 0.07 | 2.27 | 1.03 | HHsearch | | -----------------------------SF-----EDIAFTILHYERQGDQLTKASKKRLSQIADYIRHNQDIDVLVATYS--ASQSLSERRAESLRDYFQSLGLPEDRIQVQGYG--------RVVISLGR-----TQ------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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