Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | SVLLPFIIHNVQAWTCSSLQLDNEHFDISALQGDHRIESTTETPPTTRHTVYTLNACASIATDKDVNEDDQCPSGTQVCKVISVQKHSEAQTVIEVTPYARQDAQDPVIKEVTSEDVRVEGFKLEIAGTDTAQGNKRAAIIEFICDRAIDIGKPEHFGVDYAGIAKFRWRTKHACASKSDGGSKTPDADRDTPRKATSWGFFTWLFLVVFMAVASFLIFTLFLNYNRYGQVGFDLVPAMDSVKDIPYLFKDFASQVVDTVKGSGSSRSG |
1 | 1q25A | 0.13 | 0.10 | 3.46 | 1.95 | HHpred | | -EWRTTAACKKNEVPCYAFDRELKKHDLNPLIKTSGAYLV-DDS--DPDTSLFINVCRDIEVLRASPQVRVCPTGAAACLVRGD----------RAFDVGRP-QEGLKLV-------SNDRLVLSYVKEDFCDGHSPAVTITFVCPSERRETIPKLTAKS-NCRFEIEWVTEYACHRDYLESRSCSLSS-------A--------------------QHDVAVDLQPLSRVSLFYADEYTYYLSICGGSQA------------------ |
2 | 2l21A | 0.19 | 0.10 | 3.24 | 1.61 | SPARKS-K | | -------MKSNVQNDCRVTPATGHLFDLTSLKRESGYTITDS-----HNRKIELNVCAEA--------KSSCANGAAVCITDGPK----------TLNAGKL---------SKTLTYEDQVLKLVYEDGDPCPTMKHKSYFSFVCKSDGDDSQPVFLSFDETCTSYFSWHTSLACEEEVPR---------------------------------------------------------------------------------------- |
3 | 1q25A3 | 0.18 | 0.10 | 3.15 | 1.87 | FFAS-3D | | ---------ANKEVPCYAFDRELKKHDLNPLIKTSGAYLVDDSDP---DTSLFINVCRDIEVLRSSPQVRVCPTGAAACLV-------RGDRAFDVGRP----QEGLKLVS-------NDRLVLSYVKEDFCDGHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYAC---------------------------------------------------------------------------------------------- |
4 | 2v5oA4 | 0.21 | 0.11 | 3.42 | 1.41 | MUSTER | | -------------TECSVRNG-SSIVDLSPLIHRTGGYEAYDEST---NPDFYINICQPLNPMHAV----PCPAGAAVCKV----PIDGPP-----IDIGR-VAGPPILN------PIANEIYLNFESSTPCLADNYTSLIAFHCKRGVSMGTPKLLRT-SECDFVFEWETPVVCP--------------------------------------------------------------------------------------------- |
5 | 2l29A | 0.18 | 0.09 | 3.01 | 1.29 | CNFpred | | -------MKSNEHDDCQVTNPTGHLFDLSSLSGRAGFTAAY-----SKSGVVYMSICGENE---------NCPPGVGACFGQT------------RISVGKA---NKRLRYV------DQVLQLVYKDGSPCPGLSYKSVISFVCRPEAGTNRPMLISLDQTCTLFFSWHTPLACEPE------------------------------------------------------------------------------------------- |
6 | 1q25A | 0.13 | 0.10 | 3.61 | 1.74 | HHsearch-2 | | FEWRTTAACKKNEVPCYAFDRELKKHDLNPLIKTSGAYL-VDDS--DPDTSLFINVCRDIEVLRASPQVRVCPTGAAACLVRGD----------RAFDVGRP-QEGLKLV-------SNDRLVLSYVKEDFCDGHSPAVTITFVCPSERRETIPKLTAKS-NCRFEIEWVTEYACHRDYLESRSCS-------LSSAQH--------------------DVAVDLQPLSRVSLFYADEYTYYLSICGGSQA------PICNKDAAKKAG |
7 | 1q25A3 | 0.17 | 0.09 | 2.94 | 1.75 | HHsearch-2 | | ---------ANKEVPCYAFDRELKKHDLNPLIKTSGAYL-VDDS--DPDTSLFINVCRDIEVLRASPQVRVCPTGAAACLVRGD----------RAFDVGRP-QEGLKLV-------SNDRLVLSYVKEGAGDGHSPAVTITFVCPSERRGTIPKLTAKS-NCRFEIEWVTEYAC---------------------------------------------------------------------------------------------- |
8 | 1q25A3 | 0.18 | 0.10 | 3.15 | 2.03 | Neff-PPAS | | ---------ANKEVPCYAFDRELKKHDLNPLIKTSGAYLVDDSDP---DTSLFINVCRDIEVLRSSPQVRVCPTGAAACLVR-------GDRAFDVGRPQEGLKLVSN-----------DRLVLSYVKPDFCDGHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYAC---------------------------------------------------------------------------------------------- |
9 | 2v5oA2 | 0.15 | 0.08 | 2.61 | 2.46 | HHsearch | | -----------KKLECKFVQ-KHKTYDLRLLSSLTGWSL--V----HNGVSYYINLCQKIYKG-----PLGCSERASICRRTTTG---------DVQVLGLV--HTQKLGV------IGDKVVVTYSKGYPCGNKTASSVIELTCTKTVG--RPAFKRDIDSCTYYFSWDSRAACAVK------------------------------------------------------------------------------------------- |
10 | 2v5oA4 | 0.20 | 0.10 | 3.32 | 1.49 | PROSPECTOR2 | | T-------------ECSVRN-GSSIVDLSPLIHRTGGYEAYDESTNPD---FYINICQPLNPMHAV----PCPAGAAVCK----VPIDGPPIDIGRV------AGPPIL------NPIANEIYLNFESSTPCLADNYTSLIAFHCKRGVSMGTPKLLR-TSECDFVFEWETPVVCP--------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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