>PF09451 (269 residues) SVLLPFIIHNVQAWTCSSLQLDNEHFDISALQGDHRIESTTETPPTTRHTVYTLNACASI ATDKDVNEDDQCPSGTQVCKVISVQKHSEAQTVIEVTPYARQDAQDPVIKEVTSEDVRVE GFKLEIAGTDTAQGNKRAAIIEFICDRAIDIGKPEHFGVDYAGIAKFRWRTKHACASKSD GGSKTPDADRDTPRKATSWGFFTWLFLVVFMAVASFLIFTLFLNYNRYGQVGFDLVPAMD SVKDIPYLFKDFASQVVDTVKGSGSSRSG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | SVLLPFIIHNVQAWTCSSLQLDNEHFDISALQGDHRIESTTETPPTTRHTVYTLNACASIATDKDVNEDDQCPSGTQVCKVISVQKHSEAQTVIEVTPYARQDAQDPVIKEVTSEDVRVEGFKLEIAGTDTAQGNKRAAIIEFICDRAIDIGKPEHFGVDYAGIAKFRWRTKHACASKSDGGSKTPDADRDTPRKATSWGFFTWLFLVVFMAVASFLIFTLFLNYNRYGQVGFDLVPAMDSVKDIPYLFKDFASQVVDTVKGSGSSRSG | |||||||||||||||||||
1 | 1q25A | 0.13 | 0.10 | 3.46 | 1.95 | HHpred | -EWRTTAACKKNEVPCYAFDRELKKHDLNPLIKTSGAYLV-DDS--DPDTSLFINVCRDIEVLRASPQVRVCPTGAAACLVRGD----------RAFDVGRP-QEGLKLV-------SNDRLVLSYVKEDFCDGHSPAVTITFVCPSERRETIPKLTAKS-NCRFEIEWVTEYACHRDYLESRSCSLSS-------A--------------------QHDVAVDLQPLSRVSLFYADEYTYYLSICGGSQA------------------ | |||||||||||||
2 | 2l21A | 0.19 | 0.10 | 3.24 | 1.61 | SPARKS-K | -------MKSNVQNDCRVTPATGHLFDLTSLKRESGYTITDS-----HNRKIELNVCAEA--------KSSCANGAAVCITDGPK----------TLNAGKL---------SKTLTYEDQVLKLVYEDGDPCPTMKHKSYFSFVCKSDGDDSQPVFLSFDETCTSYFSWHTSLACEEEVPR---------------------------------------------------------------------------------------- | |||||||||||||
3 | 1q25A3 | 0.18 | 0.10 | 3.15 | 1.87 | FFAS-3D | ---------ANKEVPCYAFDRELKKHDLNPLIKTSGAYLVDDSDP---DTSLFINVCRDIEVLRSSPQVRVCPTGAAACLV-------RGDRAFDVGRP----QEGLKLVS-------NDRLVLSYVKEDFCDGHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYAC---------------------------------------------------------------------------------------------- | |||||||||||||
4 | 2v5oA4 | 0.21 | 0.11 | 3.42 | 1.41 | MUSTER | -------------TECSVRNG-SSIVDLSPLIHRTGGYEAYDEST---NPDFYINICQPLNPMHAV----PCPAGAAVCKV----PIDGPP-----IDIGR-VAGPPILN------PIANEIYLNFESSTPCLADNYTSLIAFHCKRGVSMGTPKLLRT-SECDFVFEWETPVVCP--------------------------------------------------------------------------------------------- | |||||||||||||
5 | 2l29A | 0.18 | 0.09 | 3.01 | 1.29 | CNFpred | -------MKSNEHDDCQVTNPTGHLFDLSSLSGRAGFTAAY-----SKSGVVYMSICGENE---------NCPPGVGACFGQT------------RISVGKA---NKRLRYV------DQVLQLVYKDGSPCPGLSYKSVISFVCRPEAGTNRPMLISLDQTCTLFFSWHTPLACEPE------------------------------------------------------------------------------------------- | |||||||||||||
6 | 1q25A | 0.13 | 0.10 | 3.61 | 1.74 | HHsearch-2 | FEWRTTAACKKNEVPCYAFDRELKKHDLNPLIKTSGAYL-VDDS--DPDTSLFINVCRDIEVLRASPQVRVCPTGAAACLVRGD----------RAFDVGRP-QEGLKLV-------SNDRLVLSYVKEDFCDGHSPAVTITFVCPSERRETIPKLTAKS-NCRFEIEWVTEYACHRDYLESRSCS-------LSSAQH--------------------DVAVDLQPLSRVSLFYADEYTYYLSICGGSQA------PICNKDAAKKAG | |||||||||||||
7 | 1q25A3 | 0.17 | 0.09 | 2.94 | 1.75 | HHsearch-2 | ---------ANKEVPCYAFDRELKKHDLNPLIKTSGAYL-VDDS--DPDTSLFINVCRDIEVLRASPQVRVCPTGAAACLVRGD----------RAFDVGRP-QEGLKLV-------SNDRLVLSYVKEGAGDGHSPAVTITFVCPSERRGTIPKLTAKS-NCRFEIEWVTEYAC---------------------------------------------------------------------------------------------- | |||||||||||||
8 | 1q25A3 | 0.18 | 0.10 | 3.15 | 2.03 | Neff-PPAS | ---------ANKEVPCYAFDRELKKHDLNPLIKTSGAYLVDDSDP---DTSLFINVCRDIEVLRSSPQVRVCPTGAAACLVR-------GDRAFDVGRPQEGLKLVSN-----------DRLVLSYVKPDFCDGHSPAVTITFVCPSERREGTIPKLTAKSNCRFEIEWVTEYAC---------------------------------------------------------------------------------------------- | |||||||||||||
9 | 2v5oA2 | 0.15 | 0.08 | 2.61 | 2.46 | HHsearch | -----------KKLECKFVQ-KHKTYDLRLLSSLTGWSL--V----HNGVSYYINLCQKIYKG-----PLGCSERASICRRTTTG---------DVQVLGLV--HTQKLGV------IGDKVVVTYSKGYPCGNKTASSVIELTCTKTVG--RPAFKRDIDSCTYYFSWDSRAACAVK------------------------------------------------------------------------------------------- | |||||||||||||
10 | 2v5oA4 | 0.20 | 0.10 | 3.32 | 1.49 | PROSPECTOR2 | T-------------ECSVRN-GSSIVDLSPLIHRTGGYEAYDESTNPD---FYINICQPLNPMHAV----PCPAGAAVCK----VPIDGPPIDIGRV------AGPPIL------NPIANEIYLNFESSTPCLADNYTSLIAFHCKRGVSMGTPKLLR-TSECDFVFEWETPVVCP--------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |