Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KKSKAREMVEEQAEESEDEYAGLGGIDGEGSSDEEDEELVKEMIDDETKAGEGDERKLAAFYADRERASDEKQVEKLFHDITTGMLRRKRARGEGGDWNDLSDEDDGGEARRRMKRRQFAKMQRALLADERISKVAENPKTKAFLR |
1 | 5k7vA1 | 0.19 | 0.16 | 5.06 | 0.80 | SPARKS-K | | IEEVVAEMIDILAESSKKSIEELARADNKTT-----EKAVAEAIEEIARLATAAIQLIEALASEEFMARAISAIAELAKKAIEAIYRLADNHTT----------------DTFMARAIAAIANLAVTAILAIAALASNH------- |
2 | 5szhA | 0.13 | 0.11 | 3.83 | 0.83 | FFAS-3D | | KRLYKAQAIQRQLEEVEERQRASEIQGRGEQDEAQLLQEWFKLVLEKNK-LMRYESELLIMAQELELEDHQSRLEQKLREKMLKEESQK------------DEKDLNEEQEVFTELMQVIEQRDKLVDSLEEQRIREKAE------ |
3 | 4jrbA2 | 0.16 | 0.07 | 2.27 | 0.25 | HHpred | | ---------------------------------RRGVG-ITGLIDDVLAI--LPIEDLKALFNEK-LETS-PDFLALYNAIRSPEFQSIVQTREKGVDVD---------------------------------------------- |
4 | 2otoB | 0.08 | 0.08 | 2.95 | 0.87 | MUSTER | | NPAIQNIRLRHENKDLKARLE----NAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE-------- |
5 | 5vjuA | 0.13 | 0.12 | 4.02 | 0.48 | CNFpred | | ELRQEHQQLAQEFQQLLQEIQQLGR------LLKGELQGIKQLREASEKARNPEKKSVLQKILEDEE-QTGQEAQQLLQELQQTGQELWQLGGSGGPEL------RQKHQQLAQKIQQLLQKHQQL-----GAKILEDEEKHIELL |
6 | 5yysA2 | 0.16 | 0.09 | 2.95 | 0.68 | HHsearch-2 | | ----------------------------------------------------SAGANLKRLYAQREEFRK-GNWKALA-----VNHEKSVDFVRLGLDMPLPEDALQMSRHNRMLRARIL--KL---DGKD----YRPEEQAAFDL |
7 | 6eunA | 0.12 | 0.12 | 4.14 | 0.92 | Neff-PPAS | | DVKKAATVAIAAAYNNGQEINGFKAGETIYDIDEDGTITKKDATAADVEADDFKGLGLKKVVTNLTKTVNENKQNVDAKVKAAESEIEKLTTKLADTDAAL-ADTDAALDATTNALNKLGENITTFAEETKTNIVKIDEKLEAASK |
8 | 2llvA | 0.17 | 0.03 | 1.12 | 0.50 | HHsearch | | -----------------------------------------------------------------------------------------QP--DL----------------------GL---TQLFADPNLIENLKKNPKTSEMM- |
9 | 2otoB | 0.08 | 0.08 | 2.95 | 0.62 | SP3 | | NPAIQNIRLRHENKDLKARLE----NAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE-------- |
10 | 2otoA | 0.10 | 0.10 | 3.52 | 0.73 | PROSPECTOR2 | | ANNPAIQNIRLRHENKDLKARLE--NAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALE--------LAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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