Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | PIQHYLRQPQRLVNALVDHKRIQQLSEEIFRLKMRPLSFMSLSIQPTVDMRVWAESNGTIYLRSVACEIRGFEYINQRFSLNLRGYLSPYQSNTGTRLEGRADLEVQVDLPPPFSLTPKPILETTGNSLLKSVLLTVKQRLLHHLLADYRQWV |
1 | 2pcsA | 0.09 | 0.08 | 3.19 | 1.20 | SPARKS-K | | EVWSKLMDPSILSKCIMGCKSLELIGEDKYKADLQIIAAVKGKYDAIIEVTDIKPPY--HYKLLVNGEGG-------PGFVNAEGVIDLTPINDE---CTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIAKSHHHHH---- |
2 | 2pcsA | 0.08 | 0.07 | 2.80 | 1.23 | FFAS-3D | | TVESKLMDPSILSKCIMGCKSLELIGEDKYKADLQGIAAVKGKYDAIIEVT-DIKPPYHYKLLVNGEG--------GPGFVNAEGVIDLTPINDE---CTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIAK---------- |
3 | 2pcsA | 0.08 | 0.07 | 2.83 | 1.33 | MUSTER | | TVWSKLMDPSILSKCIMGCKSLELIGEDKYKADLQIIAAVKGKYDAIIEVTDIKPPY-HYKLLVNGEG---------PGFVNAEGVIDLTPINDE---CTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIAKSHHHHH---- |
4 | 2pcsA | 0.10 | 0.09 | 3.37 | 1.62 | Neff-PPAS | | -VWSKLMDPSILSKCIMGCKSLELIGEDKYKADLQ-IGIAAVKGKYDAIIEVTDIKPPYHYKLLVNGEGGP-------GFVNAEGVIDLTPINDE---CTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFFKKIQKEIAKSHHHHH---- |
5 | 2ns9A | 0.16 | 0.14 | 4.54 | 1.12 | HHsearch | | EVFEFLTDPKR-FSRAFGFKSVEVE-DGSFTIELRSLGPLRGDAR--VRASFELEKPSKATVKGSG---RGAG-----STLDFTLRFAVEPSGGGSRVSWVFEGNVGGL----AASMGGRVLDSLARRMINDVISGVKRELGEA--------- |
6 | 5z8oA | 0.10 | 0.08 | 3.10 | 1.13 | SPARKS-K | | TITSIVSDFEAYPQWNPEIKGCWILARYQLRLDVEIQG-----QSGVFITAVYYPAENQIFTMLQQGDH----------FTKQEQRFSIVPLGPDS---TLLQVDLDVEVKL---PVPGPMVKKLAGETLEHLAKALEGRVEQLT-------- |
7 | 2ns9A | 0.13 | 0.11 | 3.84 | 1.15 | FFAS-3D | | TPEEFLTDPKRFSRAFPGFKSVEVEDGSFTIELRLSLGPLRGDARVRASFE-DLEKPSKATVKGSG--------RGAGSTLDFTLRFAVEPSGGGSRVSWVFEGNVG----GLAASMGGRVLDSLARRMINDVISGVKREL------------ |
8 | 2ns9A | 0.15 | 0.12 | 4.20 | 1.16 | MUSTER | | TVFEFLTDPKRFSRAFPGFKSVEVED-GSFTIELRLSL--PLRGDARVRASFEDLEKPKATVKGSGRG--------AGSTLDFTLRFAVEPSGGGSRVSWVFEGNVGGL----AASMGGRVLDSLARRMINDVISGVKRELGEA--------- |
9 | 2ns9A | 0.11 | 0.09 | 3.32 | 1.37 | Neff-PPAS | | -VFEFLTDPKRFSRAFPGFKSVEVEDGSFTIELRLSLGPLRGDARVRASFEDLEKP-SKATVKGSGRG--------AGSTLDFTLRFAVEPSGG----GSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVISGVKRELGEA--------- |
10 | 3p9vA | 0.15 | 0.12 | 4.20 | 1.12 | HHsearch | | EVFDLLADVPK-SASHFKVDKLVDLGNNAYRWEEKGVDKHAIQSV--YACTYHADKAGKITWSPI----KGEG------NGVVSGSWTLSAKGNATAVKFQTSAELTVPLPSLLKLAISPVIKHEFNSLVD--------TY-ANLKKAFLEH- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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