Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | FFKNIKPRFTSKLIYYNAIFKIETKKPHGGERILKKYLNNELDKLKRYFDNNLDFYKYYRTGSNYLDHKYFTRGKFDIKLALDSFYFEVDHSFSTSHDFKVAKIMAHDLIQVYLEDKLLMMENREPKEKSQGNPKVKQTWTGSKVALIELLYALHTEGVFNNGASDLKDVAEYFENIFNIDLGQYHRAFLEIRMRKSDQTKFLNSLKEKLVKRMENTD |
1 | 5cwcA | 0.15 | 0.11 | 3.68 | 0.80 | SPARKS-K | | ---------SEKEELRERLVKICVENAKDDTEEAREAAREAFELVREAAERIKECVENAQREG---------------------------------YDI----SEACRAAAEAFKRVAEAAKRAGITSS----------------EVLELAIRLIKECVENEGY-DISEACRAAAEAFKAGITSLKRAIEEIRKRVNDISEACRQAAEEFRKKAEELK |
2 | 1ad6A | 0.11 | 0.09 | 3.13 | 0.87 | FFAS-3D | | ----------------QQLMMILNSASDQPSENLISYFNNCKESILKRVKDIGYFKEKFAKAVGQGCVEI------------------------GSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSK--------LLNDNIFHMSLLEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMES- |
3 | 1lshA3 | 0.09 | 0.04 | 1.40 | 0.31 | HHpred | | --------------------------------------------------------------------------------------------------------------------------------ITKMSSLFVTKGKNLESEIHTVLKHLVENNQLSVHEDAPAKFLRLTAFLRNVDAGVLQSIWHKLHQQKDYRRWILDAVPAMLKRTLASEQ |
4 | 2r2iA | 0.12 | 0.09 | 3.25 | 0.67 | MUSTER | | --------------------------GNMDSKAVEELSATECHQWYKKFMTEC------PSGQLTLYEFKQFFGLKNLSPSANKYVEQMDFNKDDFMEYVAALSLVLGKVDQKLRWYFKLYDVDGNGC--------------DRGELLNIIKAIRAINRC-NEAMTAEEFTNMVFDKIDIN-GD-LEEFMEGVQKDEVLLDILTRSLTHIVKLIQNDG |
5 | 5dbkA | 0.11 | 0.09 | 3.16 | 0.72 | CNFpred | | ------------TGLYYNIALAYTHL---IHHLAIHFVNMALEGFRIINCQILIAVSYTEKGQYEEALKMYESILREATSFADKDVLLA------ITLSNMGSIYYYQQAKKYYLDSLQLQKQIDLNY---------------LDTIYEMALVCIKLE-------ELEEARTLIDKGIDAAFNAKLYLLLMLRYKYFEAKDYKAFLENEAIPLYKSAG |
6 | 2pffB | 0.08 | 0.08 | 3.22 | 0.55 | HHsearch-2 | | GFAPTTPAELVGKF-LGYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQEARIMAKRPFDKKSNSALFRAQLVAIFTDDYFEELYHVLVGDLIKFETLSELIRTTLDAEKVFTQGILEWLENPSNTPDKDSIIGVIQLAHYVVTLGYLGATLVTAVAIAEVLFFCYAYPNSLPPSILESLENNEGVPSPMLSISVQDYVNKTNSHL |
7 | 2yfaA | 0.08 | 0.08 | 3.04 | 0.76 | Neff-PPAS | | --DTAAANTLAKLDAFSKQQAYLATTFKS--PENVKLLGELGDTISAYKLSLNKMRQGYDATRAARVSMDSSAIRADQAMDALSQEVMARPEADSVRLAQYQLISKARQQLLQVRIDVRGYIAEN----------SSANEQAALRQLDAALADTDNLKQLPSEDARLQQFENAVLAYRDA-VRQFRDAVANITTSRAEMTVQGADIVKRSDALYQIQL |
8 | 1q1vA | 0.16 | 0.05 | 1.68 | 0.37 | HHsearch | | -------------------------------------------------------------------------------------------------------------------------DEP------LIKKLK---KPPTDEELKETIKKLLASA--NLEEVTMKQICKKVYENYPYDLTE----------RK----DFIKTTVKELISLEH--- |
9 | 3u44A | 0.10 | 0.08 | 3.07 | 0.72 | SP3 | | ----------------KAFFELVDRTTDRHDLDLQFLVKQVYEYSRSHPNPEAWLESFVHLYDV----------SEKSAIEELPFYQYVKEDIAMVLNGAKEKLLRALELTDNFLDDLAQIDELIQHQDDFSELYKRVP-AVSDPALLDEATDLRNGA--------KKLLEKLKTDYFTRSPEQHLKSLAEMKPVIETLVQLVISYGKRFEAAKQEKS |
10 | 4m0mA2 | 0.12 | 0.12 | 4.22 | 0.76 | PROSPECTOR2 | | RLSYLQHSLTSIANYYNLLLERVKESRTKPDSEAIKHLEQTDEVRQILESKNEKGFLWQQINHISPNARQYCEQVLSDTQKEEIRKADRDNIVNDSSKDSQQKYREIRREVIELNAKATTPEDDNQLTRSHFQKAYFEGDTQKTLNLESLSQTLNQLSKAHYGETSTDKITQRLDNFFNIPLPKLKERLVDLKEKGGNDVNAITRELGKAREDLIERK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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