Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KPTETSPKVVFDPKQGIFEISGESKPADCREFFGKLMSWLDEYKKVFIKRKKLVTGHGKLNLTLKLDYFNSTSAVYLLEVIRFFERLWEEMYNAKVLWYYQEIDEDMKETGEEFSSLVKLPFEMIV |
1 | 5cw9A | 0.12 | 0.10 | 3.61 | 0.81 | SPARKS-K | | -------------MEMDIRFRG----DDPEAYYKALREMIRQARKEMIRQARKFLDGNDLEIRITGV-----PPQVILELVKEAIRLAKENITVTVELVIRTGVKELAKEAERLAKEFNITVTYTI |
2 | 1tilD | 0.14 | 0.11 | 3.79 | 0.74 | FFAS-3D | | --SHMSLAIDLEVKQDIVRLSGELDHHTAEELREQVTDVLEN------------RAIRHIVLNLGLTFMDASGLGV---ILGRYKQIKNVGGQMVVC----AVSPAVKRLFDGLFKIIRV------ |
3 | 1tilD | 0.14 | 0.10 | 3.52 | 0.33 | HHpred | | -----AIDLEVKQDVLIVRLSGELDHHTAEELREQVTDVLEN---R---------AIRHIVLNLQLTFMDASGLGVILGRYKQIKN---VGGQMVVC---AVS-PAVKRLF----DMSGL------ |
4 | 1tilD | 0.18 | 0.14 | 4.64 | 0.85 | MUSTER | | --SHMSLAIDLEVKQDIVRLSGELDHHTAEELREQVTDVLEN-------------AIRHIVLNLGLTFMDASGLGVILGRYKQIKNV---GGQMVVC------SPAVKRLFD--SGLFKI-IRVEA |
5 | 4rnhA | 0.09 | 0.08 | 3.07 | 0.63 | CNFpred | | ------TVARMG--GDEFTLLLPSQ-GDREIALKRAIQVAELILGRLARPFTLEGREFFVTASIGVALSPQAELSLLMKNADTAMYHAKEMGKNNFQFYQAARALERLELESDLRRALLGEFVLHY |
6 | 6fcxA | 0.13 | 0.09 | 3.02 | 0.42 | HHsearch-2 | | ------------------------------ERHERLREKMRRRLES----------GD---KWFSLEFFPPRTAEGAVNLISRFDRMAAGPLYIDVTWHPAGDPGSSMMIASTAVNYCGLETILHM |
7 | 1tilD | 0.15 | 0.13 | 4.26 | 0.78 | Neff-PPAS | | --SHMSLAIDLEVKQDIVRLSGELDHHTAEELREQVTDVLENR------------AIRHIVLNLGLTFMDASGLGVILGRYKQIKNV---GGQMVVCA----VSPAVKRLFDMSGLFKIIRVEADE |
8 | 1tilD | 0.14 | 0.11 | 3.79 | 0.51 | HHsearch | | --SHMSLAIDLKQDVLIVRLSGELDHHTAEELREQVTDVLEN---R---------AIRHIVLNLQLTFMDASGLGVILGRYKQIKN---VGGQMVVC---AV-SPAVKRLFD----MSGLFIRVE- |
9 | 4wjbA | 0.12 | 0.12 | 4.19 | 0.69 | SP3 | | AGKT---IGVVTAGQGEVTLTGVDAHRDALVGAARMISFVEVLGRRYAPDARANSRNGGCFFTVEFRHPDDAVLDELDAALRAELARVADGLGAQIEQIFTYAAPRCIDTVRDAARSLGLSHMDIV |
10 | 3canA | 0.09 | 0.09 | 3.28 | 0.60 | PROSPECTOR2 | | GGGQQGIHRAVDRNCELLLIDLKSDSTVHQTFNELILKNIRRVAE----------ADFPYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYHDKQSEEVQQQCIQILTDYGLKATIGG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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