Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | LLFEWWLMKAERDYNGRRLTVGGFTKRGEAVGIFRSAPIIKRHDHCTLETADGINIKIQGTINKTRTIDNGFPLEACNAFLFGFPTAWDK |
1 | 5dilA | 0.14 | 0.13 | 4.53 | 0.81 | SPARKS-K | | KEGKFRLTIKRDIRNSLRVLVNGTFLKHNGDKSLSTLHRLNAYDQ-----NGGLVAKLVATL-TVEDEKDGILNSLFERFDEGHSKPIRA |
2 | 2lcgA | 0.10 | 0.10 | 3.69 | 0.45 | FFAS-3D | | -IKQWNTTAATVDLREGGAFSSRMEAKDGSMGFDFAGTYTKVVENKRIEAPQGVTVRVSETEYPVEQQQQGWQNNFKRHVESHLEHHHHH |
3 | 1z85B2 | 0.11 | 0.06 | 1.99 | 0.23 | HHpred | | ----------------------TLDLD-ASQ-----NLL----D----ANLEGSITVVVGP-------EGGFSEKERELLRSSTTIV--- |
4 | 2jsoA | 0.13 | 0.12 | 4.21 | 0.87 | MUSTER | | --MEWLVKKSCCNKQDNRHVLMLCDAGGAIKAEVKSDFAVK--VGDLLSPLQNALYCINR--EKLHTVKSSYSPDEWERQCKVAGK--TQ |
5 | 4k17A | 0.09 | 0.08 | 3.01 | 0.77 | CNFpred | | RVENKVLVLTS-----CRAFLLSARIPSKLELTFSYLEIHGVICPAQMVVETKCNMSMKMV-SPEDVSEV--LAHIGTCLRRIFPGLSPL |
6 | 2cbnA2 | 0.15 | 0.06 | 1.88 | 0.32 | HHsearch-2 | | --------------------------------------------------------DAPGALNAQALKAAGVPPPLFQELKAGKTITLED |
7 | 2jsoA | 0.11 | 0.10 | 3.62 | 0.87 | Neff-PPAS | | ---EWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGDLLSPLQNALYCINHTVKVLSASS--YSPDEWERQCKVAGKTQ-- |
8 | 2cbnA2 | 0.15 | 0.06 | 1.87 | 0.38 | HHsearch | | --------------------------------------------------------DAPGALNAQALKAAGVPPPLFQELKAGKTITLE- |
9 | 2p0fA | 0.11 | 0.09 | 3.24 | 0.70 | SP3 | | VLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAHGRHLHIRTIPGHEFLLQSD-HETELRA----RTVIERLV--------- |
10 | 2lghA | 0.11 | 0.11 | 3.99 | 0.44 | PROSPECTOR2 | | ASSDWHTTGSRVDLVVGGRFCHHMAAKDGSAGFDFTGTFTRVEAPTRLVMDDGREVDVQETSHTPAQQQAGW-QGILDNFKGLEHHHHHH |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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