Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ALKEAFASAPAGTVILDTLEIWHPTFDEPIRVVRDHADLTARLEAGAPRDGGKRVTFAALAFEFSPPPVDTAPVPEITVTLDNVGSDITDALEGAAVSQQVIEITWRPYLSTDLNGPHMDPPITMTLTDVEADTMRVTGRARMLDAGNKSFPSITY |
1 | 2bbdA2 | 0.12 | 0.11 | 3.85 | 0.65 | SPARKS-K | | EGGLGADGEPLATVLPKVIEIPTPASSAPIHVAYLQPGQIYKRQLVYNSTSGINNDPTEYELKIV----RGVPTDKIKVSW----AALQAENQAEYAPYSGASAIIDFYFLDLTHAPSDSIEYDLALQN----QDNVYSLYVSYVL---PYYDQLA |
2 | 4ksrA2 | 0.09 | 0.07 | 2.67 | 0.66 | FFAS-3D | | ------------------------------------VDMFIKIGESKDKTHAEEIDVLAWSWGMSQSGSMHMAGKVNVLSFTKYIDKSTPNLMMACSSGKHYPQAKLTIRKAGGENQVEYLIITLKVSSVSTGGSTENVTLNFAQVQVDYQPQKA- |
3 | 1xdpA | 0.12 | 0.08 | 2.70 | 0.28 | HHpred | | -------------------------------------------------------YLMVSPQNSRRANAQQGLPSGITLKLNNLDKGLVDRLYAASSSGVPVNLLVRGMCSLIPNLEGIS--DNIRAISIVDNGGDKKVYLSSADWMTRNIDYR-- |
4 | 3jr0A | 0.15 | 0.14 | 4.74 | 0.69 | MUSTER | | DALEYATTRKKSEVVYSGVSVTIPTAPTNVSLLKTLTPSSGTLAPFFDTVNNKMVVFKTLFFKLSIVGTWPSGTANRSMQLTFSGSVPDTLVSSRNSATTTDNILLATFFSVDKDGFLATNGSTLTIQSNGASFTATTIKIIAEQ----------- |
5 | 3gdbA | 0.07 | 0.05 | 2.12 | 0.89 | CNFpred | | -----------TDQDVRLYSTKLEV-KTKLRVAHKGGKVYMAFST-AWKELTLSDNWTNEEFDLSSLA---KTIYAVKLFFEHEGA------------VKDYQFNLGQLTISDN--QEPQSPTSFSVVKQSLKNQEAEAVVQFKG----------- |
6 | 5urw11 | 0.11 | 0.09 | 3.21 | 0.33 | HHsearch-2 | | -------------SVHLYLK-AN------------GSDIKG--DSTQLGRAD-SIECVAYSQKVFTAREAGSGLEGIEITKR-IDKSSPLLMKALC-ENQVIDATFKFFRPNPDGTTEQ--FYTVSIKKARINAIQQTVPNSFVPASTNLPPMETL |
7 | 2vbeA4 | 0.05 | 0.05 | 2.37 | 0.85 | Neff-PPAS | | HEQLDLDYCGSTGVVIENVNGGFSFSNSWIAADADGTEQFTGIYFRTPTSTQSHKIVSGVHINT---ANKNTAANNQSIAIEQSAIFVFVSGCTLTGDEWAVNIVDINECVSFDKCIFNKPLRYLRSGGVSVTDCYLAGITEVQKPEGRYNTYRGC |
8 | 4lq8A | 0.18 | 0.10 | 3.13 | 0.58 | HHsearch | | KDKAVYEEGPNG--KPQLKEISSP---KPLKFAGTGDDAIAYIEH-----GGE--IYT-------LA-----------VT----RGKYKEMMKEVELN-QGQSVDLSQAEDIIIGQGQ-------------------------------------- |
9 | 4e9oX | 0.11 | 0.11 | 3.90 | 0.69 | SP3 | | NIETKKAISNAR---LKPLDIHYNE-SKPTTIQNTGKLVRINFKGGYISGGFLPNEYVLSSLHIYWGKEDDYGKYSGEINLVHWNKKKYSSYEEAKKHDDGLIIISIFLQVLDHKNVYFQKIVN-QLDSIRSANTSAPFDSVF-YLDNLLPSKLDY |
10 | 6b7lA1 | 0.10 | 0.08 | 3.12 | 0.58 | PROSPECTOR2 | | MEKAANSIAKREAGLYQANLMSRDGDKATPRMIKDLDGLALVYPKGETVQVGKVETNSQWLGQADQKADKDGIYPVQLIRNSE--------------RLGTSTALSSVTNDHNLI-------TFQDQPVIDLQGKEIKRWVFDFTRTGTKFSDNSL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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