Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | IHILFGESPAGSLKNAFRDMGIYEQERVVFFRDIFSVGPVWMLHEESGRENRIEWMKDLISDDYEEYPEYRNKFEKTIRQIQDIPDGSHIIIWHGDNAHEQTGLQYVVYLLKGKNIDISAINT |
1 | 2ioyA1 | 0.08 | 0.07 | 2.57 | 0.78 | SPARKS-K | | --SDNVKGGEMAAEFIAKALKG--KGNVVELEG----------IPGSAARDRGKGFDEAIAKYDFDRSKGLSVMENILQAQPKID-----AVFAQND----EMALGAIKAIEAAGIIVVGFDG |
2 | 3lm8A1 | 0.15 | 0.12 | 4.13 | 0.60 | FFAS-3D | | --WIGVDKGTVTLLDA-------------GIIPVEAFGDFDSITEQERRRIEKAAPALHVYQAEKDQTDLDLALDWALEK-----QPDIIQIFTGGRADHFLGNIQLLYKGVKTNIKIRLIDK |
3 | 4ddtA4 | 0.12 | 0.11 | 4.01 | 0.29 | HHpred | | LIIVESPTKAETLSRFLGRASSRKERIVHEALFTATRGHVYDLVTKGGI--H-GV-EEEVPVYNSLIDDKTETLR-ALREIS--LEADEILVATDPDVEGEKISWDVTQYLLPSTRSLRRIE- |
4 | 2l82A | 0.13 | 0.11 | 3.93 | 0.66 | MUSTER | | FVVFSSDPILKEIVREIKRQGV----RVVLLYSD---------QDEKRRRERLEEFEKQ-GVDVRTVED-KEDFRENIREIWERYPQLDVVVIVTTD--DKEWIKDFIEEAKERGVEVFVVYN |
5 | 4wesA | 0.08 | 0.07 | 2.58 | 0.67 | CNFpred | | LNLVQCHRSINYIAEMMET----------KYGIPWIKCNFI------GVDGIVETLRDMAKCF-EVIAEEIAAIQDDLDYFKEKLQGKTACLYVGG--SRSHTYMNMLKSFG---VDSLVAGF |
6 | 4rulA | 0.18 | 0.15 | 5.03 | 0.47 | HHsearch-2 | | LVIVESPAKAKTINKYL---G---SDYVVK----SSVGHIRDLPTKDE---R-GALVNRMGVDPWEYPGKEKVV-SELKQLA--EKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVF |
7 | 3ksmA2 | 0.04 | 0.04 | 2.01 | 0.67 | Neff-PPAS | | ------AAGQLAARALLATLDLSKERNIALL-----RLRAGNASTDQREQGFLDVLRKHDKIRIIAAPYAGDDRGAARSELRLLKETPTIDGLFTPNESTTIGALVAIRQSGSKQFGFIGFDQ |
8 | 1d0nA6 | 0.14 | 0.09 | 3.05 | 0.34 | HHsearch | | ----------------VVPNE-VVVQRLLQVK-----GRR-VVRA-----------TEV----PVS----WESFNNGD--CFILDLGNNIYQWCGSNRFERLKATQVSKGIRDGRAQVSVFE- |
9 | 1lq7A | 0.12 | 0.07 | 2.28 | 0.72 | SP3 | | ------GSRVKALEEKVKALEEKVKA-------------LGGGGRIEELKKKWEELKKKIEGGGGEVKKVEEEVKKLEEEIKKL--------------------------------------- |
10 | 3x0hA | 0.07 | 0.07 | 2.76 | 0.62 | PROSPECTOR2 | | VKVMLITCWRPLVWEQITSAGLAGSVDFVGSMNDLQPNCSRPQGFYDIARNNIAGWVQNTKIGHRNADSIIGSYTIMLNAMRAANPRVKVIVDKSDATIEAVAIPGWVQQQTTAESPVVIADC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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