Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KIAVVRCETVSEVCPGTGCFKAFNEKKVHFDRYDKKDEIIGFFTCGGCPGRRVYRLIKALKKHGASAVHLSSCMKTKKYPPCPHIDSIIKIIEDAGMEVVEGTH |
1 | 1y81A | 0.21 | 0.18 | 5.80 | 0.88 | SPARKS-K | | KIALVGASKNPAK-YGNIILKDLLSKYRSVRELPKDVDVIVFV----VPPKVGLQVAKEAVEAGFKKLWFQPGAES---------EEIRRFLEKAGVEYSFGRC |
2 | 5hj7A2 | 0.16 | 0.12 | 4.13 | 0.58 | FFAS-3D | | PVGVFD--------SGVGGLTVARA----IIDQLPDEDIVYVGDTGNGPYAHALAIGDDLVGRGVKALVIA----------CSASSACLRDARERQVPVVE--- |
3 | 5odcD | 0.24 | 0.20 | 6.28 | 0.33 | HHpred | | KIIGFCCNWC-----TYGGADTAGVGR---MQYPPSIRIIR-VMCSG---RIEPSLILKAFKEGADGVFVGGCHLG----DCHYDMMLYELLEELGIELNHE-- |
4 | 6nboA | 0.14 | 0.13 | 4.59 | 0.79 | MUSTER | | -TTRIRTHVDVDTDAGLRHLHRVLDTRETLRG-QVEIQIVAFPQSGVLKRPGTDALLADALAAGADLLGGLDPCAIEGDPV-KAVDVLFGIAERYGRGLDL--H |
5 | 3qezA | 0.19 | 0.16 | 5.27 | 0.95 | CNFpred | | YIDTVKIGYPLVLSEGMDIIAEFRKR--------FGCRIIADFKVAD-IPETNEKICRATFKAGADAIIVHGFP------GADSVRACLNVAEEMGREVFLLTE |
6 | 3vocA | 0.12 | 0.09 | 3.03 | 0.35 | HHsearch-2 | | ----------------------------AVADDF-QASVM--GPLAKNDWGSFKKQLQTLKNNGVYAITT-DVWWGSAQFDWSYYKTYANAVKEAGLKWVISTH |
7 | 4pe6A1 | 0.17 | 0.15 | 5.06 | 0.91 | Neff-PPAS | | FIALSNGFIGN---GWRQTIAKFEEAAKQAQADGLIGKYKVVNAPGNNSATEQVAQIKSLLLQKPDALLINPASPT-------ALQPVIQQACDAGVKVVVFDS |
8 | 5odcD | 0.25 | 0.21 | 6.55 | 0.40 | HHsearch | | KIIGFCCNWC----TYGGADTAGVGRM----QYPPSIRIIR-VMCSG---RIEPSLILKAFKEGADGVFVGGCHLG----DCHYDMMLYELLEELGIELEWIS- |
9 | 2d5aA | 0.20 | 0.17 | 5.53 | 0.79 | SP3 | | KIALVGASPKPER-DANIVMKYLLE-HGYVLDIPDKIEVVDLFV----KPKLTMEYVEQAIKKGAKVVWFQYNTYN---------REASKKADEAGLIIVANRC |
10 | 4z0nA1 | 0.12 | 0.11 | 3.70 | 0.51 | PROSPECTOR2 | | KLGVTYYKFDDNFLAGRNDIQIAKEKYPNIE--------LLNNDSQN-SQSILNDQIEVLINKGVNVLVINL-------VDPTAGQSVIDKAKAANIPIILFNK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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