Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ISLGSHCHTAQILKGLGLRTWSAPFDWIFSSPGMVRDCLADDFAALLDRRHYESTPLAERQAPNETRCRHLLYRDRHAIPFVFNHHDPATSDEDYRFLQAGVRRLRAALDRPGARNRFYLMTALPTEAATVHSIRDALVERAQARGADNHLTVLQLHQG |
1 | 4bj1A1 | 0.09 | 0.06 | 2.13 | 0.74 | SPARKS-K | | ----------------------------ISYVPSLSKFLSKNLR--------------------SMKNCIVFFDK-------------VEHIHQYAGIDRAVSETLSLINSIDHIVYFKFEQLDKIEPSKLTEFINVLSVLEKS--NNIAFKVLIYSNS |
2 | 2g6tA2 | 0.15 | 0.11 | 3.80 | 0.73 | FFAS-3D | | --ISDDCWGGLVSSYLGFKFNS-PFINFYIHNDDYIKFLEND--YYLEQE----LKVEQEGNVYSCTPKGSLGTGDNKIILNFNHQ--ASFAEAKNDWDERKTR----INKKN----LFVKLIKDDNEKLVKRFDNL---------------------- |
3 | 2g6tA2 | 0.09 | 0.08 | 2.85 | 0.61 | HHpred | | -IISDDCWGGLVSSYLGFK-FNSPFINFYIHNDDYIKFLEN--DYYLEQE-LKVEQEGN---VYSCT-PKGSLGTGDNKIILNFNHQASF-AEAKNDWDERKTRIN-----KKNLFVKLI-K--DDNEKLVKRFDN-LP------YKNKV---CFHP-- |
4 | 5tgzA | 0.10 | 0.09 | 3.47 | 0.72 | MUSTER | | FIVYAYMYILWKAHSHAVAKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAASVEAGGLFEGFDLVLLGCSTWGDDS------IELQDDFIPLFDSLEET-----GAQGRKVACFGCGDSSWEYFC--GAVDAIEEKLKNLGAEIVQDGLRIDGD |
5 | 5hosA | 0.11 | 0.09 | 3.20 | 0.71 | CNFpred | | --------EYAYFAGKHMNTVRLPILWERLQPRELDPAQLALIRQAVANA----------------AKMYVIVDVH--NYAKYYGHTIGSTKVPISTFNDLWRRLAIAFKSDNAVIFGLMNEPYDIDPQAWATAAQASIDTIRKTG--ATNLILVPGAL |
6 | 2g6tA2 | 0.10 | 0.08 | 3.04 | 0.74 | HHsearch-2 | | ITISDDCWGGLVSSYLGFKF-NSPFINFYIHNDDYIKFLEN--DYYLEQE-LKVEQEGNV---YSCT-PKGSLGTGDNKIILNFNHQASF-AEAKNDWDERKTRI-----NKKNLFVKLI--K-DDNEKLVKR---FDN----LPYKN---KVCFHPKP |
7 | 2w9xB2 | 0.08 | 0.08 | 2.99 | 0.74 | Neff-PPAS | | -TNSQMAFGPLTAKAFDADYQINASSGFGIVRNYNGTSPDKSLLSLYP-----YTLNNPDQLYHNKHWKVIGLGTNDFSTALNDNERWKTREALHADYVANYVKFVKQLHSNNARAQFILMNSDQSNGEIAEQVGKVVAQLKGGGL--HQVEQIVFKGL |
8 | 2g6tA2 | 0.09 | 0.08 | 2.86 | 1.23 | HHsearch | | TIISDDCWGGLVSSYLGFKF-NSPFINFYIHNDDYIKFLEN--DYYLEQE-LKVEQEGN---VYSCT-PKGSLGTGDNKIILNFNHQASF-AEAKNDWDERKTRI-----NKKNLFVKLI-K--DDNEKLVKRFD---N----LPYKN---KVCFHPK- |
9 | 5m99A1 | 0.05 | 0.04 | 1.73 | 0.65 | SP3 | | ------------------------------------------FKDAVENTTSSPYWDIMSLEDHSGQDHWHWKINSKGQKVWYFGLFGYNSQKVREEVKKIVDFWISKIDAAKH----IYGWSWDDGIQESAEYFEWFRDYVLSKKPDAILVGEVFSGN |
10 | 3u37A2 | 0.14 | 0.13 | 4.54 | 0.67 | PROSPECTOR2 | | YSRASANYATMTAKALNAGGWGVFCGWDNDVRHNLPSVYEKVCGLAKGEMNEELGAQEEYDFASWFNQPEFLNPDDGKTYKMRTNTDGTRNREDELKIVSAIIDFLTMLHNPNAQIIWSYGMLGSDLNLVITEGINKYKENA----GDEKVSFFQLPNT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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