Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | RFIMDTTGLTDIQARQSLGQDTICAGMKEILDLIADARLHLQISCYVPFPSVYNELQEFANNNNCDPEVVAKIDTWLVKKTPDRYEVQIPSRIFHEYVSYMRERINKGMNVAEEAIREASRECLIQNSQAKSKHMVEKDIDREVVGSVVNKFRNKYRSALRYGILDSAPDIDVLLLAKELDAAVVAKDYGIQKWAEQLGVRFVPAETFPRMLQEYLR |
1 | 3ix7A | 0.27 | 0.16 | 4.81 | 1.00 | HHpred | | GKVLDTSVLVDGRVAE-----------------VAAVG-FLEGPLWVP-HFVLKELQHFADSQD----------------------------------PLRRAKGRRGLETLERLREAAPLE-VLE----------------------T-T----PK-----G--ES-VDEKLLFLARDLEAALVTNDHALLQ-ARIYGVKALSIQALAQALRPQ-- |
2 | 2lcqA | 0.21 | 0.12 | 3.66 | 1.06 | HHsearch-2 | | TLVLDSSVFIQGI----------------------------DIEGYTT-PSVVEEIKDRESKIF-----LESLIGKVKIAEPSK--------------------------------------------------------------ESIDRIIQVAKE-TGEVNELSKADIEVLALAYELKGEIFSDDYNVQNIASLLGLRFRTLKRGIKKVIKWRY |
3 | 2lcqA | 0.21 | 0.12 | 3.66 | 1.58 | HHsearch | | TLVLDSSVFIQGI----------------------------DIEGYTT-PSVVEEIKDRESKIF-----LESLIGKVKIAEPSK--------------------------------------------------------------ESIDRIIQVAKE-TGEVNELSKADIEVLALAYELKGEIFSDDYNVQNIASLLGLRFRTLKRGIKKVIKWR- |
4 | 5cwcA | 0.16 | 0.13 | 4.42 | 0.83 | SPARKS-K | | EELRERLVKICVENAKRKGDDEAREAAREAFELVREAAERAGIDVLELAIRLIKECVENAQREGYDAEAFKRVAEAAKRAGITSSEVELAIRLIKECVENAQREISEACRAAAEAFKRVAEAAKRAGITSS-----------ETLKRAIEEIRKRVEEAQREG-----NDI----------------SEACRQAAEEFRKKAEELKRR--------- |
5 | 4uosA | 0.15 | 0.12 | 4.17 | 0.88 | FFAS-3D | | ----------NEEVKKM-----LEKMIEEIKKMLEKAIKKVK----EMLEKMIKEIKKMLENGEDSEKILKKAKEM--------------AEKILKMVIELAEKILKKAKEMAEKILKKVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIMLENGEDSEKILMAEKILKMVIELAEKILKKAKEM------AEKILKKVKEL-- |
6 | 2lcqA1 | 0.25 | 0.12 | 3.87 | 1.28 | HHpred | | TLVLDSSVFIQGI----------------------------DIEGYTT-PSVVEEIKDRESKI-----FLESLAGKVKIAEPSKESIDR----------------------IIQVAKET--------------------------G---------------EVNELSKADIEVLALAYELKGEIFSDDYNVQNIASLLGLRFRTLKR---------- |
7 | 3i8oA | 0.22 | 0.13 | 4.22 | 0.72 | MUSTER | | KVCVDTCVVID-----------------RITELIERG-KLKDATIIIP-EAVVSELEYQANG---------------------------------------REIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAK------------------------GEID--IRKVAKETNSILLTSDWIQYNLAKAQGIEAYFLEAAEEEVELVLD |
8 | 1u6gA | 0.13 | 0.12 | 3.99 | 0.63 | CNFpred | | QFLADTERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRR--VQVYL-HESTQDELARKCEQVLHLEIFHTEFQNLLDADK------NEDLGRMYNLVSRIQDGLGELKKLLETHIHNQGLAAIEKCGEAALN-------DPKMYVQTVLDVHKKYNALVMSA---FNNDAGFVAALDKACGRFINNNAVTKMAQSS--------SKSPELLARYCD |
9 | 2dokA | 0.19 | 0.12 | 3.88 | 0.81 | HHsearch-2 | | FLVPDTNGFIDH--------------LASLARLLE----SRKYILVVP-LIVINELDGLAKAGG-----YA---------------------------RVVQEKARKSIEFLEQRFESRDSCLRALT----------------SRGNELESI------AFRSE-DIGNNDDLILSCCLHYEVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAQ---- |
10 | 4tqlA | 0.15 | 0.14 | 4.80 | 0.70 | Neff-PPAS | | -----------KQMVQELEKDRMEKLYKEMVELIQKAIELMRKIFQEVKQEVEKAIEEMKKLYDEAKKKIEQMIQQI-KQGGDKQKMEELLKRAKEEMKKVKDKMEKLLEKLKQIMQEAKQKMEKLLKQLKEEMKKMKEKMEKLLKEMKQRMEEVKKKMDDELLEKIKKNDDLKKIAEDLIKKAEENIKEAKKIAEQLVKRAKQIEKAKQVAEELIK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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