Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TLAHWICNSYRCYLGVELLKSNNEGNESLLKSLWHHSDAILCCTLKALPVFTFSNQAGLDMLETTLVALQDTPLEKIFDDHGRKILFSEFPQIIQQGFVCLQGGICLSSMGRPVSYERVVAWKVLNEEENAHCQKLRFF |
1 | 3p7nA1 | 0.11 | 0.09 | 3.14 | 1.48 | SPARKS-K | | -------------------------PAQWVLDLIESPIASVVSDPRLDNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTP-FRNAVLVAPIYDDDDELLYFLGSQV |
2 | 3lyxA | 0.12 | 0.09 | 3.31 | 1.34 | FFAS-3D | | --------------------------KQRAKAFDYVFDAIVVTDLQGF--IIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRMLHKDGHIGWIESMCV-PIYGENYQMVGALGIN- |
3 | 5dkkB | 0.11 | 0.09 | 3.13 | 0.83 | HHpred | | ---------------------------SFIKALQTAQQNFVVTDPSPDNPIVYASQGFLNLTGYSLDQILGRNCRFLQGPETDPKAVERIRKAIEQGNDMSVCLLNYRVDGTTFWNQFFIA-ALRDAGGNVTNFVGVQC |
4 | 3p7nA1 | 0.10 | 0.08 | 2.96 | 1.62 | MUSTER | | ------------------------PAQWVLDLIEASPIASVVSDPRLDNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGT-PFRNAVLVAPIYDDDDELLYFLGSQV |
5 | 3p7nA | 0.11 | 0.09 | 3.14 | 1.12 | CNFpred | | --------------------------QWVLDLIEASPIASVVSDPRADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVL-VAPIYDDDDELLYFLGSQV |
6 | 3p7nA | 0.12 | 0.09 | 3.34 | 0.84 | HHsearch-2 | | -------------------------PAQWVLDLEASPIASVVSDPRADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNA-VLVAPIYDDDDELLYFLGSQV |
7 | 3p7nA1 | 0.11 | 0.09 | 3.14 | 1.61 | Neff-PPAS | | -------------------------AQWVLDLIEASPIASVVSDPRLDNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNA-VLVAPIYDDDDELLYFLGSQV |
8 | 3p7nA | 0.12 | 0.09 | 3.33 | 1.30 | HHsearch | | -------------------------PAQWVLDLEASPIASVVSDPRADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNA-VLVAPIYDDDDELLYFLGSQ- |
9 | 3p7nA1 | 0.11 | 0.09 | 3.35 | 0.96 | PROSPECTOR2 | | ------------------------PAQWVLDLIEASPIASVVSDRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNA-VLVAPIYDDDDELLYFLGSQV |
10 | 3p7nA | 0.12 | 0.09 | 3.30 | 0.77 | SAM | | --------------------------AQWVLDLEASPIASVVSDPD--NPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVA-PIYDDDDELLYFLGS-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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